FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640303_a_at:

>probe:Drosophila_2:1640303_a_at:466:233; Interrogation_Position=1937; Antisense; AATGCTATTGACCAGAGCCTTCATG
>probe:Drosophila_2:1640303_a_at:524:585; Interrogation_Position=1960; Antisense; TGGACACCATGCTGGAAGACCTCAC
>probe:Drosophila_2:1640303_a_at:171:269; Interrogation_Position=1980; Antisense; CTCACCTCGGTGCTAAAGTTCTTTA
>probe:Drosophila_2:1640303_a_at:505:365; Interrogation_Position=2013; Antisense; GAATCCGTTCTTTACCGCATTTTGT
>probe:Drosophila_2:1640303_a_at:374:561; Interrogation_Position=2050; Antisense; GGAACTTCGAGGACGTGCAACTTTC
>probe:Drosophila_2:1640303_a_at:448:273; Interrogation_Position=2070; Antisense; CTTTCGGTTATTGCGGATCACACTT
>probe:Drosophila_2:1640303_a_at:362:599; Interrogation_Position=2119; Antisense; TGTACTTCATGTCCCTGAATCCAAA
>probe:Drosophila_2:1640303_a_at:723:529; Interrogation_Position=2153; Antisense; GGGTCTCCTTCAGAAGTGTCCGAAA
>probe:Drosophila_2:1640303_a_at:599:167; Interrogation_Position=2175; Antisense; AAATGTATCGGCCACTTCAGCGTTT
>probe:Drosophila_2:1640303_a_at:430:671; Interrogation_Position=2190; Antisense; TTCAGCGTTTGTCCCTTGTAAGTGT
>probe:Drosophila_2:1640303_a_at:440:13; Interrogation_Position=2243; Antisense; ATTCAAGGGCCATCAGCATGTCATA
>probe:Drosophila_2:1640303_a_at:505:5; Interrogation_Position=2268; Antisense; ATTGATGCCCAATTGTTTAACCACA
>probe:Drosophila_2:1640303_a_at:409:391; Interrogation_Position=2295; Antisense; GAAACGTTAGCTAGTTCCGCAAATA
>probe:Drosophila_2:1640303_a_at:91:369; Interrogation_Position=2442; Antisense; GAATGGTTCTGATTTCCGGTTTTCG

Paste this into a BLAST search page for me
AATGCTATTGACCAGAGCCTTCATGTGGACACCATGCTGGAAGACCTCACCTCACCTCGGTGCTAAAGTTCTTTAGAATCCGTTCTTTACCGCATTTTGTGGAACTTCGAGGACGTGCAACTTTCCTTTCGGTTATTGCGGATCACACTTTGTACTTCATGTCCCTGAATCCAAAGGGTCTCCTTCAGAAGTGTCCGAAAAAATGTATCGGCCACTTCAGCGTTTTTCAGCGTTTGTCCCTTGTAAGTGTATTCAAGGGCCATCAGCATGTCATAATTGATGCCCAATTGTTTAACCACAGAAACGTTAGCTAGTTCCGCAAATAGAATGGTTCTGATTTCCGGTTTTCG

Full Affymetrix probeset data:

Annotations for 1640303_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720