FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640309_s_at:

>probe:Drosophila_2:1640309_s_at:191:555; Interrogation_Position=3145; Antisense; GGACTGTCGTGTTGTTGTTTTATAC
>probe:Drosophila_2:1640309_s_at:242:117; Interrogation_Position=3170; Antisense; AGCTTTACGATTTCATCCACTTGCA
>probe:Drosophila_2:1640309_s_at:510:307; Interrogation_Position=3186; Antisense; CCACTTGCAATATATTTTAGCCTCA
>probe:Drosophila_2:1640309_s_at:324:315; Interrogation_Position=3205; Antisense; GCCTCAACTTTAAATGCGTCGCGTG
>probe:Drosophila_2:1640309_s_at:298:329; Interrogation_Position=3225; Antisense; GCGTGTCCCCTGTTGTTGTTTCTTT
>probe:Drosophila_2:1640309_s_at:417:601; Interrogation_Position=3241; Antisense; TGTTTCTTTTTAGTTAGGCGGCTCT
>probe:Drosophila_2:1640309_s_at:545:71; Interrogation_Position=3256; Antisense; AGGCGGCTCTATTTAATTTCTATTT
>probe:Drosophila_2:1640309_s_at:658:369; Interrogation_Position=3452; Antisense; GAAGGTAAAAGAGAGCGCGCAGTCA
>probe:Drosophila_2:1640309_s_at:331:267; Interrogation_Position=3471; Antisense; CAGTCAGCGGGCGTTTGATTTGTAA
>probe:Drosophila_2:1640309_s_at:544:723; Interrogation_Position=3514; Antisense; TTGCATCAACTGCATTGACGGCCTT
>probe:Drosophila_2:1640309_s_at:175:345; Interrogation_Position=3525; Antisense; GCATTGACGGCCTTATCTAAACGAT
>probe:Drosophila_2:1640309_s_at:364:387; Interrogation_Position=3597; Antisense; GAAAACGAACCATAATTCCTAGATT
>probe:Drosophila_2:1640309_s_at:310:209; Interrogation_Position=3631; Antisense; AAGCAAGGGCGCGTGAAGAGAAATC
>probe:Drosophila_2:1640309_s_at:661:97; Interrogation_Position=3693; Antisense; AGATCGAAACAAGTTCAGCAACAGC

Paste this into a BLAST search page for me
GGACTGTCGTGTTGTTGTTTTATACAGCTTTACGATTTCATCCACTTGCACCACTTGCAATATATTTTAGCCTCAGCCTCAACTTTAAATGCGTCGCGTGGCGTGTCCCCTGTTGTTGTTTCTTTTGTTTCTTTTTAGTTAGGCGGCTCTAGGCGGCTCTATTTAATTTCTATTTGAAGGTAAAAGAGAGCGCGCAGTCACAGTCAGCGGGCGTTTGATTTGTAATTGCATCAACTGCATTGACGGCCTTGCATTGACGGCCTTATCTAAACGATGAAAACGAACCATAATTCCTAGATTAAGCAAGGGCGCGTGAAGAGAAATCAGATCGAAACAAGTTCAGCAACAGC

Full Affymetrix probeset data:

Annotations for 1640309_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720