FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640311_s_at:

>probe:Drosophila_2:1640311_s_at:250:433; Interrogation_Position=1025; Antisense; GAGGTGGAGGCCAAATCCGCCCGCC
>probe:Drosophila_2:1640311_s_at:231:299; Interrogation_Position=1062; Antisense; CGCTCATTCACATCTGATCAACCAA
>probe:Drosophila_2:1640311_s_at:148:397; Interrogation_Position=1117; Antisense; GACAACCCCACAGAACTCGATTTGA
>probe:Drosophila_2:1640311_s_at:64:363; Interrogation_Position=1140; Antisense; GAATTCTTTTTGTTTAATTTCTGCA
>probe:Drosophila_2:1640311_s_at:140:183; Interrogation_Position=1215; Antisense; AAAACGATATGGACAGCAGCCCCTA
>probe:Drosophila_2:1640311_s_at:386:455; Interrogation_Position=1220; Antisense; GATATGGACAGCAGCCCCTAAAGCA
>probe:Drosophila_2:1640311_s_at:340:559; Interrogation_Position=1364; Antisense; GGAAAAAGCCACGACGGGCGCGAAT
>probe:Drosophila_2:1640311_s_at:662:407; Interrogation_Position=1376; Antisense; GACGGGCGCGAATATTACAACACAT
>probe:Drosophila_2:1640311_s_at:37:699; Interrogation_Position=1411; Antisense; TTTAAGCCACTAACTACAACCCCAG
>probe:Drosophila_2:1640311_s_at:336:317; Interrogation_Position=1445; Antisense; GCCTCCAGACAGACAAACTCATTTT
>probe:Drosophila_2:1640311_s_at:65:399; Interrogation_Position=1456; Antisense; GACAAACTCATTTTCATCTATATTT
>probe:Drosophila_2:1640311_s_at:580:517; Interrogation_Position=1526; Antisense; GTGTGTGGACAAGCGCGTTTTTCCC
>probe:Drosophila_2:1640311_s_at:663:477; Interrogation_Position=1542; Antisense; GTTTTTCCCCAACTTCTGATCATAC
>probe:Drosophila_2:1640311_s_at:235:149; Interrogation_Position=1553; Antisense; ACTTCTGATCATACGCGAGATACAT

Paste this into a BLAST search page for me
GAGGTGGAGGCCAAATCCGCCCGCCCGCTCATTCACATCTGATCAACCAAGACAACCCCACAGAACTCGATTTGAGAATTCTTTTTGTTTAATTTCTGCAAAAACGATATGGACAGCAGCCCCTAGATATGGACAGCAGCCCCTAAAGCAGGAAAAAGCCACGACGGGCGCGAATGACGGGCGCGAATATTACAACACATTTTAAGCCACTAACTACAACCCCAGGCCTCCAGACAGACAAACTCATTTTGACAAACTCATTTTCATCTATATTTGTGTGTGGACAAGCGCGTTTTTCCCGTTTTTCCCCAACTTCTGATCATACACTTCTGATCATACGCGAGATACAT

Full Affymetrix probeset data:

Annotations for 1640311_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720