FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640313_s_at:

>probe:Drosophila_2:1640313_s_at:435:677; Interrogation_Position=1047; Antisense; TAGAGGCCAGGCAACGGTCGCTCCT
>probe:Drosophila_2:1640313_s_at:354:535; Interrogation_Position=1062; Antisense; GGTCGCTCCTTGAACGAAACACTTT
>probe:Drosophila_2:1640313_s_at:313:695; Interrogation_Position=1084; Antisense; TTTCAACATTTGACTTTTACCGTGT
>probe:Drosophila_2:1640313_s_at:662:707; Interrogation_Position=1100; Antisense; TTACCGTGTTTTACTCCTTCTGAGA
>probe:Drosophila_2:1640313_s_at:51:115; Interrogation_Position=1175; Antisense; AGCAGCACAACACCGGCACGTATAA
>probe:Drosophila_2:1640313_s_at:558:227; Interrogation_Position=1246; Antisense; AATGGCTCACTTATTGGGATCGCCC
>probe:Drosophila_2:1640313_s_at:317:193; Interrogation_Position=1277; Antisense; AACTCCAAATCCATTCGCGCACATT
>probe:Drosophila_2:1640313_s_at:717:297; Interrogation_Position=1292; Antisense; CGCGCACATTCAACGACAAACTTCG
>probe:Drosophila_2:1640313_s_at:693:415; Interrogation_Position=1388; Antisense; GAGCCCACCCCAAATGAGAGACATA
>probe:Drosophila_2:1640313_s_at:406:461; Interrogation_Position=1416; Antisense; GATTTTATATCTATGCTTGTCAATA
>probe:Drosophila_2:1640313_s_at:518:493; Interrogation_Position=1434; Antisense; GTCAATATCCATGTTTTTTGCCGAT
>probe:Drosophila_2:1640313_s_at:220:683; Interrogation_Position=1493; Antisense; TTGTAACCTTGGTGTTTGCCTTTTG
>probe:Drosophila_2:1640313_s_at:35:481; Interrogation_Position=1506; Antisense; GTTTGCCTTTTGTTGATTGCTAGAA
>probe:Drosophila_2:1640313_s_at:404:459; Interrogation_Position=1579; Antisense; GATTTGTTTCTTTCGTTTATAAGCA

Paste this into a BLAST search page for me
TAGAGGCCAGGCAACGGTCGCTCCTGGTCGCTCCTTGAACGAAACACTTTTTTCAACATTTGACTTTTACCGTGTTTACCGTGTTTTACTCCTTCTGAGAAGCAGCACAACACCGGCACGTATAAAATGGCTCACTTATTGGGATCGCCCAACTCCAAATCCATTCGCGCACATTCGCGCACATTCAACGACAAACTTCGGAGCCCACCCCAAATGAGAGACATAGATTTTATATCTATGCTTGTCAATAGTCAATATCCATGTTTTTTGCCGATTTGTAACCTTGGTGTTTGCCTTTTGGTTTGCCTTTTGTTGATTGCTAGAAGATTTGTTTCTTTCGTTTATAAGCA

Full Affymetrix probeset data:

Annotations for 1640313_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720