FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640329_s_at:

>probe:Drosophila_2:1640329_s_at:639:673; Interrogation_Position=1062; Antisense; TACCGAGAACCAACCATACACATTT
>probe:Drosophila_2:1640329_s_at:672:397; Interrogation_Position=1111; Antisense; GACAGGCAGTCTTCTAGATTATGTT
>probe:Drosophila_2:1640329_s_at:202:123; Interrogation_Position=1141; Antisense; AGCGATACTTATGTTACCCCGCATC
>probe:Drosophila_2:1640329_s_at:691:257; Interrogation_Position=1169; Antisense; CACATAGCCCCATTTTCGTTTAAGT
>probe:Drosophila_2:1640329_s_at:505:649; Interrogation_Position=1189; Antisense; TAAGTTTAAGTCAAGGCGTTCATTT
>probe:Drosophila_2:1640329_s_at:162:223; Interrogation_Position=1201; Antisense; AAGGCGTTCATTTATGTCTTTAGTA
>probe:Drosophila_2:1640329_s_at:277:17; Interrogation_Position=1242; Antisense; ATTTATATGTTTACTCCAGAGCGAG
>probe:Drosophila_2:1640329_s_at:345:181; Interrogation_Position=1289; Antisense; AAAACGCTACTCGATCAATGCTAAG
>probe:Drosophila_2:1640329_s_at:667:701; Interrogation_Position=1327; Antisense; TTATTCGAGATCTATAACACGACGC
>probe:Drosophila_2:1640329_s_at:204:17; Interrogation_Position=1379; Antisense; ATTTTTGAGCGAATAGCACTTTTTG
>probe:Drosophila_2:1640329_s_at:27:111; Interrogation_Position=1393; Antisense; AGCACTTTTTGCAAACACGAAATGG
>probe:Drosophila_2:1640329_s_at:288:175; Interrogation_Position=1547; Antisense; AAACCAATTGGAATCGGCTTTAGCA
>probe:Drosophila_2:1640329_s_at:180:565; Interrogation_Position=1556; Antisense; GGAATCGGCTTTAGCAAGCGCAAAA
>probe:Drosophila_2:1640329_s_at:444:245; Interrogation_Position=1590; Antisense; AATTAACTATGCTAAGCTGCCTAAA

Paste this into a BLAST search page for me
TACCGAGAACCAACCATACACATTTGACAGGCAGTCTTCTAGATTATGTTAGCGATACTTATGTTACCCCGCATCCACATAGCCCCATTTTCGTTTAAGTTAAGTTTAAGTCAAGGCGTTCATTTAAGGCGTTCATTTATGTCTTTAGTAATTTATATGTTTACTCCAGAGCGAGAAAACGCTACTCGATCAATGCTAAGTTATTCGAGATCTATAACACGACGCATTTTTGAGCGAATAGCACTTTTTGAGCACTTTTTGCAAACACGAAATGGAAACCAATTGGAATCGGCTTTAGCAGGAATCGGCTTTAGCAAGCGCAAAAAATTAACTATGCTAAGCTGCCTAAA

Full Affymetrix probeset data:

Annotations for 1640329_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720