FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640337_a_at:

>probe:Drosophila_2:1640337_a_at:530:599; Interrogation_Position=4151; Antisense; TGTAACCATCTATGTTAACCCGCCC
>probe:Drosophila_2:1640337_a_at:478:303; Interrogation_Position=4170; Antisense; CCGCCCGAAATCCTGTGTAGTGAAT
>probe:Drosophila_2:1640337_a_at:29:457; Interrogation_Position=4232; Antisense; GTAGTATAGGTAGCAATTTCCCCAA
>probe:Drosophila_2:1640337_a_at:239:279; Interrogation_Position=4258; Antisense; CTAAAACCACTGTAACCGATCTTTG
>probe:Drosophila_2:1640337_a_at:503:145; Interrogation_Position=4310; Antisense; ACTCGTATGAAATATGTGCACTTTG
>probe:Drosophila_2:1640337_a_at:231:565; Interrogation_Position=4370; Antisense; GGCACTAAGCTAATGGAGCCATTGT
>probe:Drosophila_2:1640337_a_at:53:127; Interrogation_Position=4386; Antisense; AGCCATTGTGGAATCGGTATCCTCA
>probe:Drosophila_2:1640337_a_at:503:539; Interrogation_Position=4401; Antisense; GGTATCCTCATGCTATCCTAATCAT
>probe:Drosophila_2:1640337_a_at:446:265; Interrogation_Position=4423; Antisense; CATGAATGCTTTGCTAAACAGTGAC
>probe:Drosophila_2:1640337_a_at:493:453; Interrogation_Position=4485; Antisense; GATCATGGATCAAGCCGAGTCTGTC
>probe:Drosophila_2:1640337_a_at:617:125; Interrogation_Position=4497; Antisense; AGCCGAGTCTGTCAAATCGCAGATT
>probe:Drosophila_2:1640337_a_at:90:45; Interrogation_Position=4512; Antisense; ATCGCAGATTTTCGGCTAGCTTATT
>probe:Drosophila_2:1640337_a_at:131:191; Interrogation_Position=4624; Antisense; AACTACTCTTAGCTACTCATACATT
>probe:Drosophila_2:1640337_a_at:394:471; Interrogation_Position=4694; Antisense; GTTCTCTGAAATGCAGTACTACCCA

Paste this into a BLAST search page for me
TGTAACCATCTATGTTAACCCGCCCCCGCCCGAAATCCTGTGTAGTGAATGTAGTATAGGTAGCAATTTCCCCAACTAAAACCACTGTAACCGATCTTTGACTCGTATGAAATATGTGCACTTTGGGCACTAAGCTAATGGAGCCATTGTAGCCATTGTGGAATCGGTATCCTCAGGTATCCTCATGCTATCCTAATCATCATGAATGCTTTGCTAAACAGTGACGATCATGGATCAAGCCGAGTCTGTCAGCCGAGTCTGTCAAATCGCAGATTATCGCAGATTTTCGGCTAGCTTATTAACTACTCTTAGCTACTCATACATTGTTCTCTGAAATGCAGTACTACCCA

Full Affymetrix probeset data:

Annotations for 1640337_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720