FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640341_s_at:

>probe:Drosophila_2:1640341_s_at:274:547; Interrogation_Position=2370; Antisense; GGATGAATTTATTTTGCGACCTTCT
>probe:Drosophila_2:1640341_s_at:484:323; Interrogation_Position=2385; Antisense; GCGACCTTCTAATCTAAAGTGGCAT
>probe:Drosophila_2:1640341_s_at:192:569; Interrogation_Position=2405; Antisense; GGCATGTGCCCCAATAAACTATTTC
>probe:Drosophila_2:1640341_s_at:279:653; Interrogation_Position=2419; Antisense; TAAACTATTTCGTGTCCCGTTCTTG
>probe:Drosophila_2:1640341_s_at:369:471; Interrogation_Position=2437; Antisense; GTTCTTGTCCACTGTACATTGTGCT
>probe:Drosophila_2:1640341_s_at:622:489; Interrogation_Position=2450; Antisense; GTACATTGTGCTATATGCCAAACCA
>probe:Drosophila_2:1640341_s_at:208:15; Interrogation_Position=2483; Antisense; ATTTTGTTTGTTCACTAGACTTAAG
>probe:Drosophila_2:1640341_s_at:232:401; Interrogation_Position=2500; Antisense; GACTTAAGACAACCGACGTCACTGC
>probe:Drosophila_2:1640341_s_at:201:409; Interrogation_Position=2514; Antisense; GACGTCACTGCAGCATGGATTTCAT
>probe:Drosophila_2:1640341_s_at:128:65; Interrogation_Position=2528; Antisense; ATGGATTTCATTTGTCTTTTCACTG
>probe:Drosophila_2:1640341_s_at:22:499; Interrogation_Position=2541; Antisense; GTCTTTTCACTGAATAAACGCAGGT
>probe:Drosophila_2:1640341_s_at:666:77; Interrogation_Position=2562; Antisense; AGGTTGAACCAGATGCTACTTGTGT
>probe:Drosophila_2:1640341_s_at:589:693; Interrogation_Position=2711; Antisense; TTTGCTGACGCAAATTACGTTGAAA
>probe:Drosophila_2:1640341_s_at:123:397; Interrogation_Position=2798; Antisense; GACAATCTGAAGTTCTCTTTTGTTT

Paste this into a BLAST search page for me
GGATGAATTTATTTTGCGACCTTCTGCGACCTTCTAATCTAAAGTGGCATGGCATGTGCCCCAATAAACTATTTCTAAACTATTTCGTGTCCCGTTCTTGGTTCTTGTCCACTGTACATTGTGCTGTACATTGTGCTATATGCCAAACCAATTTTGTTTGTTCACTAGACTTAAGGACTTAAGACAACCGACGTCACTGCGACGTCACTGCAGCATGGATTTCATATGGATTTCATTTGTCTTTTCACTGGTCTTTTCACTGAATAAACGCAGGTAGGTTGAACCAGATGCTACTTGTGTTTTGCTGACGCAAATTACGTTGAAAGACAATCTGAAGTTCTCTTTTGTTT

Full Affymetrix probeset data:

Annotations for 1640341_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720