FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640371_a_at:

>probe:Drosophila_2:1640371_a_at:211:259; Interrogation_Position=3115; Antisense; CACATTCTCACTTCAATTTACGATT
>probe:Drosophila_2:1640371_a_at:128:257; Interrogation_Position=3176; Antisense; GACAGTAATGTAGTTTATTTGGGTT
>probe:Drosophila_2:1640371_a_at:405:689; Interrogation_Position=3224; Antisense; TATTATGGGTTTGAATACTTTCTTT
>probe:Drosophila_2:1640371_a_at:557:147; Interrogation_Position=3253; Antisense; ACTTATCGTTTTGAGATGGTTGACT
>probe:Drosophila_2:1640371_a_at:262:541; Interrogation_Position=3270; Antisense; GGTTGACTGTGATAGTTGATTGTAC
>probe:Drosophila_2:1640371_a_at:602:465; Interrogation_Position=3284; Antisense; GTTGATTGTACAGTTAAAACTCTTA
>probe:Drosophila_2:1640371_a_at:41:431; Interrogation_Position=3360; Antisense; GAGTACATATTAATCCCAAGTCTAG
>probe:Drosophila_2:1640371_a_at:46:711; Interrogation_Position=3369; Antisense; TTAATCCCAAGTCTAGACATACTAT
>probe:Drosophila_2:1640371_a_at:61:193; Interrogation_Position=3488; Antisense; AACTATGTGTATTTACCAAATCGAA
>probe:Drosophila_2:1640371_a_at:482:201; Interrogation_Position=3522; Antisense; AAGGCGAACTAATCGTTAACGATCT
>probe:Drosophila_2:1640371_a_at:631:231; Interrogation_Position=3532; Antisense; AATCGTTAACGATCTAAGTGTATAC
>probe:Drosophila_2:1640371_a_at:385:657; Interrogation_Position=3575; Antisense; TAAACTTTACGATGCGAAAACAAAT
>probe:Drosophila_2:1640371_a_at:242:183; Interrogation_Position=3607; Antisense; AAAACGAACATCAGCAATGCCCACA
>probe:Drosophila_2:1640371_a_at:372:257; Interrogation_Position=3628; Antisense; CACACACCGAAACCCTCTAAGAATT

Paste this into a BLAST search page for me
CACATTCTCACTTCAATTTACGATTGACAGTAATGTAGTTTATTTGGGTTTATTATGGGTTTGAATACTTTCTTTACTTATCGTTTTGAGATGGTTGACTGGTTGACTGTGATAGTTGATTGTACGTTGATTGTACAGTTAAAACTCTTAGAGTACATATTAATCCCAAGTCTAGTTAATCCCAAGTCTAGACATACTATAACTATGTGTATTTACCAAATCGAAAAGGCGAACTAATCGTTAACGATCTAATCGTTAACGATCTAAGTGTATACTAAACTTTACGATGCGAAAACAAATAAAACGAACATCAGCAATGCCCACACACACACCGAAACCCTCTAAGAATT

Full Affymetrix probeset data:

Annotations for 1640371_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720