FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640380_a_at:

>probe:Drosophila_2:1640380_a_at:105:215; Interrogation_Position=4959; Antisense; AAGAGTACACAGAACACCCTCTACT
>probe:Drosophila_2:1640380_a_at:37:179; Interrogation_Position=5059; Antisense; AAACTGCTCATAGTTCGCTTTCTGT
>probe:Drosophila_2:1640380_a_at:109:299; Interrogation_Position=5074; Antisense; CGCTTTCTGTCCCTATAATTTTGTA
>probe:Drosophila_2:1640380_a_at:464:27; Interrogation_Position=5109; Antisense; ATACCAAGAAATCGATCCACTCCAC
>probe:Drosophila_2:1640380_a_at:626:47; Interrogation_Position=5123; Antisense; ATCCACTCCACGATACACTATTTAG
>probe:Drosophila_2:1640380_a_at:617:7; Interrogation_Position=5210; Antisense; ATTTTAAGCTTTCTGGGTACCATGG
>probe:Drosophila_2:1640380_a_at:605:393; Interrogation_Position=5234; Antisense; GAAAGTCTGCTTTGGTAGTCCTTAA
>probe:Drosophila_2:1640380_a_at:247:95; Interrogation_Position=5258; Antisense; AGATTCCATTTCACCAATATTGAGG
>probe:Drosophila_2:1640380_a_at:170:243; Interrogation_Position=5273; Antisense; AATATTGAGGTGTTCCTGTTGACCA
>probe:Drosophila_2:1640380_a_at:300:555; Interrogation_Position=5299; Antisense; GGACCAAACATATTTCGCATGCGTA
>probe:Drosophila_2:1640380_a_at:411:717; Interrogation_Position=5312; Antisense; TTCGCATGCGTAAGACAGCAGCCAT
>probe:Drosophila_2:1640380_a_at:329:113; Interrogation_Position=5328; Antisense; AGCAGCCATCTGACCCAAGAAAAGA
>probe:Drosophila_2:1640380_a_at:448:15; Interrogation_Position=5394; Antisense; ATTTTATTGCGCTGTACTCCCTGAA
>probe:Drosophila_2:1640380_a_at:468:287; Interrogation_Position=5477; Antisense; CGGCTAGTGCGGCTATGTAATAAAA

Paste this into a BLAST search page for me
AAGAGTACACAGAACACCCTCTACTAAACTGCTCATAGTTCGCTTTCTGTCGCTTTCTGTCCCTATAATTTTGTAATACCAAGAAATCGATCCACTCCACATCCACTCCACGATACACTATTTAGATTTTAAGCTTTCTGGGTACCATGGGAAAGTCTGCTTTGGTAGTCCTTAAAGATTCCATTTCACCAATATTGAGGAATATTGAGGTGTTCCTGTTGACCAGGACCAAACATATTTCGCATGCGTATTCGCATGCGTAAGACAGCAGCCATAGCAGCCATCTGACCCAAGAAAAGAATTTTATTGCGCTGTACTCCCTGAACGGCTAGTGCGGCTATGTAATAAAA

Full Affymetrix probeset data:

Annotations for 1640380_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720