FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640417_a_at:

>probe:Drosophila_2:1640417_a_at:301:557; Interrogation_Position=3975; Antisense; GGACTTTTCATACACGGCCGAATGG
>probe:Drosophila_2:1640417_a_at:401:675; Interrogation_Position=4042; Antisense; TAGCCCGATCCTTATAGCCTATGGC
>probe:Drosophila_2:1640417_a_at:63:127; Interrogation_Position=4057; Antisense; AGCCTATGGCCTGCTTTTGCTTTTA
>probe:Drosophila_2:1640417_a_at:542:191; Interrogation_Position=4234; Antisense; AACTTTTGATTGTTGCTCACTGGCC
>probe:Drosophila_2:1640417_a_at:514:161; Interrogation_Position=4278; Antisense; AAATACCTAGTTGTCCATGTTGTGG
>probe:Drosophila_2:1640417_a_at:91:727; Interrogation_Position=4315; Antisense; TTGTCAATCATCCATGCAACCGGTT
>probe:Drosophila_2:1640417_a_at:461:359; Interrogation_Position=4330; Antisense; GCAACCGGTTTAGCATACAGTGTAC
>probe:Drosophila_2:1640417_a_at:94:85; Interrogation_Position=4348; Antisense; AGTGTACCCAGAAATCATCCCACAT
>probe:Drosophila_2:1640417_a_at:681:43; Interrogation_Position=4364; Antisense; ATCCCACATTGTCGTTGCATTGTAC
>probe:Drosophila_2:1640417_a_at:344:341; Interrogation_Position=4390; Antisense; GCATATAGAGTTGTTTCCTTTTCCA
>probe:Drosophila_2:1640417_a_at:646:499; Interrogation_Position=4436; Antisense; GTCTGACAAACCCTAGGAAAGCCTT
>probe:Drosophila_2:1640417_a_at:507:559; Interrogation_Position=4451; Antisense; GGAAAGCCTTATACGCCAAGTTGTA
>probe:Drosophila_2:1640417_a_at:456:221; Interrogation_Position=4527; Antisense; AAGTGTATGTCTACACCCCAGAGCA
>probe:Drosophila_2:1640417_a_at:29:265; Interrogation_Position=4545; Antisense; CAGAGCAGTCATTGCAACCTATTTT

Paste this into a BLAST search page for me
GGACTTTTCATACACGGCCGAATGGTAGCCCGATCCTTATAGCCTATGGCAGCCTATGGCCTGCTTTTGCTTTTAAACTTTTGATTGTTGCTCACTGGCCAAATACCTAGTTGTCCATGTTGTGGTTGTCAATCATCCATGCAACCGGTTGCAACCGGTTTAGCATACAGTGTACAGTGTACCCAGAAATCATCCCACATATCCCACATTGTCGTTGCATTGTACGCATATAGAGTTGTTTCCTTTTCCAGTCTGACAAACCCTAGGAAAGCCTTGGAAAGCCTTATACGCCAAGTTGTAAAGTGTATGTCTACACCCCAGAGCACAGAGCAGTCATTGCAACCTATTTT

Full Affymetrix probeset data:

Annotations for 1640417_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720