FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640433_a_at:

>probe:Drosophila_2:1640433_a_at:343:711; Interrogation_Position=10022; Antisense; TTAAGTATCCAAGGCGGCAGCGGCA
>probe:Drosophila_2:1640433_a_at:188:15; Interrogation_Position=10070; Antisense; ATTAGCCGACATAAACTAGCAGTTA
>probe:Drosophila_2:1640433_a_at:220:43; Interrogation_Position=10098; Antisense; ATCGTATCGCATAAGAAGCCATCTA
>probe:Drosophila_2:1640433_a_at:593:203; Interrogation_Position=10113; Antisense; AAGCCATCTACAGTAGACGCCCGGA
>probe:Drosophila_2:1640433_a_at:394:409; Interrogation_Position=10128; Antisense; GACGCCCGGACTGGATGAACGCTGA
>probe:Drosophila_2:1640433_a_at:539:177; Interrogation_Position=10177; Antisense; AAACTGTCTACCAATTTCCGATCCG
>probe:Drosophila_2:1640433_a_at:226:451; Interrogation_Position=10205; Antisense; GATCGATCCATCGTTTGAACAGTAT
>probe:Drosophila_2:1640433_a_at:132:17; Interrogation_Position=10228; Antisense; ATTTTGTGCACAAAGCCGCGTCGCT
>probe:Drosophila_2:1640433_a_at:81:329; Interrogation_Position=10245; Antisense; GCGTCGCTTTATTTTCTACACTTAC
>probe:Drosophila_2:1640433_a_at:139:279; Interrogation_Position=10260; Antisense; CTACACTTACAATTCGAACCCTAAT
>probe:Drosophila_2:1640433_a_at:243:709; Interrogation_Position=10300; Antisense; TTAAGCACCAACGAAGCGCTCATTT
>probe:Drosophila_2:1640433_a_at:704:487; Interrogation_Position=10344; Antisense; GTACTTATAGCAACTCCGAAATCTG
>probe:Drosophila_2:1640433_a_at:46:221; Interrogation_Position=10388; Antisense; AAGTGCTAACAGTTGCCCAGGCAAA
>probe:Drosophila_2:1640433_a_at:449:243; Interrogation_Position=9958; Antisense; AATTAAATCACCAGCCAAGGCGAAC

Paste this into a BLAST search page for me
TTAAGTATCCAAGGCGGCAGCGGCAATTAGCCGACATAAACTAGCAGTTAATCGTATCGCATAAGAAGCCATCTAAAGCCATCTACAGTAGACGCCCGGAGACGCCCGGACTGGATGAACGCTGAAAACTGTCTACCAATTTCCGATCCGGATCGATCCATCGTTTGAACAGTATATTTTGTGCACAAAGCCGCGTCGCTGCGTCGCTTTATTTTCTACACTTACCTACACTTACAATTCGAACCCTAATTTAAGCACCAACGAAGCGCTCATTTGTACTTATAGCAACTCCGAAATCTGAAGTGCTAACAGTTGCCCAGGCAAAAATTAAATCACCAGCCAAGGCGAAC

Full Affymetrix probeset data:

Annotations for 1640433_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720