FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640457_s_at:

>probe:Drosophila_2:1640457_s_at:562:505; Interrogation_Position=1013; Antisense; GTGCCTTCAAATACAGCCGTTGTGG
>probe:Drosophila_2:1640457_s_at:147:173; Interrogation_Position=1045; Antisense; AAAGATGTCGGTGACCTGCAGCGTT
>probe:Drosophila_2:1640457_s_at:16:413; Interrogation_Position=1057; Antisense; GACCTGCAGCGTTGTGGGTACCAAA
>probe:Drosophila_2:1640457_s_at:217:555; Interrogation_Position=1095; Antisense; GGACCTTTGCCAATGTAACGCTGAC
>probe:Drosophila_2:1640457_s_at:689:97; Interrogation_Position=1129; Antisense; AGATCGCTTCATTCTCAAACCAGAC
>probe:Drosophila_2:1640457_s_at:335:591; Interrogation_Position=1159; Antisense; TGGTGTTCCTAACGCCATTCTGACA
>probe:Drosophila_2:1640457_s_at:364:229; Interrogation_Position=1235; Antisense; AATGCGGCCAATGTCTACGGTGGGA
>probe:Drosophila_2:1640457_s_at:311:123; Interrogation_Position=1277; Antisense; AGCGACGTCACAACTGTGCGTGTTA
>probe:Drosophila_2:1640457_s_at:23:347; Interrogation_Position=1335; Antisense; GCATCTGTGCTGAGGTGCTGATTCT
>probe:Drosophila_2:1640457_s_at:546:333; Interrogation_Position=1351; Antisense; GCTGATTCTGTGCATCATCATTCTC
>probe:Drosophila_2:1640457_s_at:645:425; Interrogation_Position=1412; Antisense; GAGAGTGATACTGATCCCCAAGAAC
>probe:Drosophila_2:1640457_s_at:453:265; Interrogation_Position=952; Antisense; CAGTTGCGAGTTTGACGGCGTGTCC
>probe:Drosophila_2:1640457_s_at:601:235; Interrogation_Position=982; Antisense; AATCGAAGTAATTGCCCGCGTTGTT
>probe:Drosophila_2:1640457_s_at:330:299; Interrogation_Position=998; Antisense; CGCGTTGTTGTACGAGTGCCTTCAA

Paste this into a BLAST search page for me
GTGCCTTCAAATACAGCCGTTGTGGAAAGATGTCGGTGACCTGCAGCGTTGACCTGCAGCGTTGTGGGTACCAAAGGACCTTTGCCAATGTAACGCTGACAGATCGCTTCATTCTCAAACCAGACTGGTGTTCCTAACGCCATTCTGACAAATGCGGCCAATGTCTACGGTGGGAAGCGACGTCACAACTGTGCGTGTTAGCATCTGTGCTGAGGTGCTGATTCTGCTGATTCTGTGCATCATCATTCTCGAGAGTGATACTGATCCCCAAGAACCAGTTGCGAGTTTGACGGCGTGTCCAATCGAAGTAATTGCCCGCGTTGTTCGCGTTGTTGTACGAGTGCCTTCAA

Full Affymetrix probeset data:

Annotations for 1640457_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720