FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640488_a_at:

>probe:Drosophila_2:1640488_a_at:255:503; Interrogation_Position=2294; Antisense; GTCCCAAGTGCTCGAGGTTACCGAT
>probe:Drosophila_2:1640488_a_at:148:475; Interrogation_Position=2310; Antisense; GTTACCGATGGTGTCCTACAGACGA
>probe:Drosophila_2:1640488_a_at:665:587; Interrogation_Position=2356; Antisense; TGGAGGCGGCACTTAGCACAGACAT
>probe:Drosophila_2:1640488_a_at:420:71; Interrogation_Position=2434; Antisense; AGGCGCATCACATTATCGGTCGCGT
>probe:Drosophila_2:1640488_a_at:177:183; Interrogation_Position=2473; Antisense; AAAAGCGCGGTGTGGACATCACTGA
>probe:Drosophila_2:1640488_a_at:76:153; Interrogation_Position=2488; Antisense; ACATCACTGATTTGCCGCTGGGAGA
>probe:Drosophila_2:1640488_a_at:226:427; Interrogation_Position=2509; Antisense; GAGATCTCCAGAAATTCAGTCCTTT
>probe:Drosophila_2:1640488_a_at:679:41; Interrogation_Position=2540; Antisense; ATCGGATATCGTTGCAGTGGCGGAC
>probe:Drosophila_2:1640488_a_at:569:83; Interrogation_Position=2555; Antisense; AGTGGCGGACTACTCCAACAATGTC
>probe:Drosophila_2:1640488_a_at:466:585; Interrogation_Position=2600; Antisense; TGGAACCGCCAGTAGCAGCATCGTG
>probe:Drosophila_2:1640488_a_at:549:561; Interrogation_Position=2624; Antisense; GGAACAACTGCGTTTGCTCAAGAAG
>probe:Drosophila_2:1640488_a_at:548:219; Interrogation_Position=2646; Antisense; AAGTGCGCAAGGGATTTGGCCAAAC
>probe:Drosophila_2:1640488_a_at:325:707; Interrogation_Position=2661; Antisense; TTGGCCAAACAGTCGTAGGTTCCTA
>probe:Drosophila_2:1640488_a_at:718:541; Interrogation_Position=2678; Antisense; GGTTCCTATGACTATTTCTGTGGTA

Paste this into a BLAST search page for me
GTCCCAAGTGCTCGAGGTTACCGATGTTACCGATGGTGTCCTACAGACGATGGAGGCGGCACTTAGCACAGACATAGGCGCATCACATTATCGGTCGCGTAAAAGCGCGGTGTGGACATCACTGAACATCACTGATTTGCCGCTGGGAGAGAGATCTCCAGAAATTCAGTCCTTTATCGGATATCGTTGCAGTGGCGGACAGTGGCGGACTACTCCAACAATGTCTGGAACCGCCAGTAGCAGCATCGTGGGAACAACTGCGTTTGCTCAAGAAGAAGTGCGCAAGGGATTTGGCCAAACTTGGCCAAACAGTCGTAGGTTCCTAGGTTCCTATGACTATTTCTGTGGTA

Full Affymetrix probeset data:

Annotations for 1640488_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720