FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640509_s_at:

>probe:Drosophila_2:1640509_s_at:298:499; Interrogation_Position=2489; Antisense; GTCTGGCGGAAATGGAACTCATCAC
>probe:Drosophila_2:1640509_s_at:301:193; Interrogation_Position=2504; Antisense; AACTCATCACGGAACGGCGATCTGT
>probe:Drosophila_2:1640509_s_at:646:457; Interrogation_Position=2536; Antisense; GATATGAGAGCCATTGCCATGCGAA
>probe:Drosophila_2:1640509_s_at:403:325; Interrogation_Position=2556; Antisense; GCGAAAGATTGGCAGCGGACCCTTC
>probe:Drosophila_2:1640509_s_at:142:385; Interrogation_Position=2643; Antisense; GAACTTTGACAAGGTCTCGCCGAAG
>probe:Drosophila_2:1640509_s_at:525:69; Interrogation_Position=2678; Antisense; AGGCGCTGAGGAGCAGGTTTCTTCT
>probe:Drosophila_2:1640509_s_at:150:307; Interrogation_Position=2741; Antisense; CCACCTCCATCCATTTTGAAAACTG
>probe:Drosophila_2:1640509_s_at:514:679; Interrogation_Position=2796; Antisense; TAGTGTCCTGTCTTGTCTCGTATAA
>probe:Drosophila_2:1640509_s_at:140:497; Interrogation_Position=2810; Antisense; GTCTCGTATAATTTGTGTGTTCCTA
>probe:Drosophila_2:1640509_s_at:140:517; Interrogation_Position=2824; Antisense; GTGTGTTCCTAGTTGGTACATATCT
>probe:Drosophila_2:1640509_s_at:394:21; Interrogation_Position=2843; Antisense; ATATCTTACGTCCATAGTCTTCTAG
>probe:Drosophila_2:1640509_s_at:468:89; Interrogation_Position=2858; Antisense; AGTCTTCTAGTGTCTACTGTACTTA
>probe:Drosophila_2:1640509_s_at:691:479; Interrogation_Position=2884; Antisense; GTATGTATGCGTGTCCAATCGATTA
>probe:Drosophila_2:1640509_s_at:361:41; Interrogation_Position=2901; Antisense; ATCGATTATTGTCTTCCAGCTGTAC

Paste this into a BLAST search page for me
GTCTGGCGGAAATGGAACTCATCACAACTCATCACGGAACGGCGATCTGTGATATGAGAGCCATTGCCATGCGAAGCGAAAGATTGGCAGCGGACCCTTCGAACTTTGACAAGGTCTCGCCGAAGAGGCGCTGAGGAGCAGGTTTCTTCTCCACCTCCATCCATTTTGAAAACTGTAGTGTCCTGTCTTGTCTCGTATAAGTCTCGTATAATTTGTGTGTTCCTAGTGTGTTCCTAGTTGGTACATATCTATATCTTACGTCCATAGTCTTCTAGAGTCTTCTAGTGTCTACTGTACTTAGTATGTATGCGTGTCCAATCGATTAATCGATTATTGTCTTCCAGCTGTAC

Full Affymetrix probeset data:

Annotations for 1640509_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720