FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640513_a_at:

>probe:Drosophila_2:1640513_a_at:559:105; Interrogation_Position=1616; Antisense; AGAACAGCGATTCCCAGCGAATGCA
>probe:Drosophila_2:1640513_a_at:501:205; Interrogation_Position=1688; Antisense; AAGCCCTTGCGAAATAGTGTACGAT
>probe:Drosophila_2:1640513_a_at:483:215; Interrogation_Position=1715; Antisense; AAGTTGGCATCTCTTCATGCCGATA
>probe:Drosophila_2:1640513_a_at:440:49; Interrogation_Position=1731; Antisense; ATGCCGATATGAATGTTCGCTATGA
>probe:Drosophila_2:1640513_a_at:221:223; Interrogation_Position=1757; Antisense; AAGGAACACGCTCTAACACGTCAGC
>probe:Drosophila_2:1640513_a_at:560:155; Interrogation_Position=1772; Antisense; ACACGTCAGCTATCGGAAATGTGCC
>probe:Drosophila_2:1640513_a_at:108:395; Interrogation_Position=1787; Antisense; GAAATGTGCCGACTGTACCGATTGC
>probe:Drosophila_2:1640513_a_at:610:679; Interrogation_Position=1845; Antisense; TATCGGTCGGGCAGTTGCAACAAAA
>probe:Drosophila_2:1640513_a_at:402:685; Interrogation_Position=1870; Antisense; TATCGAAGCCTATGCCGAGGACATT
>probe:Drosophila_2:1640513_a_at:224:195; Interrogation_Position=1900; Antisense; AACTGAACACGAACTTCTCGAATTG
>probe:Drosophila_2:1640513_a_at:585:173; Interrogation_Position=1966; Antisense; AAAGCGTCTGACGTTGGAGGAATCG
>probe:Drosophila_2:1640513_a_at:611:237; Interrogation_Position=1986; Antisense; AATCGGAGGCAGATGCCGCCTGTAA
>probe:Drosophila_2:1640513_a_at:556:357; Interrogation_Position=2021; Antisense; GCAAAAATAACACATCCCTTACAGG
>probe:Drosophila_2:1640513_a_at:684:611; Interrogation_Position=2050; Antisense; TGAAAATACCCCTCAAGTTGCTAAA

Paste this into a BLAST search page for me
AGAACAGCGATTCCCAGCGAATGCAAAGCCCTTGCGAAATAGTGTACGATAAGTTGGCATCTCTTCATGCCGATAATGCCGATATGAATGTTCGCTATGAAAGGAACACGCTCTAACACGTCAGCACACGTCAGCTATCGGAAATGTGCCGAAATGTGCCGACTGTACCGATTGCTATCGGTCGGGCAGTTGCAACAAAATATCGAAGCCTATGCCGAGGACATTAACTGAACACGAACTTCTCGAATTGAAAGCGTCTGACGTTGGAGGAATCGAATCGGAGGCAGATGCCGCCTGTAAGCAAAAATAACACATCCCTTACAGGTGAAAATACCCCTCAAGTTGCTAAA

Full Affymetrix probeset data:

Annotations for 1640513_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720