FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640515_s_at:

>probe:Drosophila_2:1640515_s_at:81:491; Interrogation_Position=3583; Antisense; GTAAAATTTATTGTGCGCGCATGTT
>probe:Drosophila_2:1640515_s_at:571:507; Interrogation_Position=3595; Antisense; GTGCGCGCATGTTGCAGAAACCAAA
>probe:Drosophila_2:1640515_s_at:106:69; Interrogation_Position=3631; Antisense; ATGGCTTTTGGCTATCGATTTTTAA
>probe:Drosophila_2:1640515_s_at:512:291; Interrogation_Position=3667; Antisense; CGATTTTTTCGAGTTGACAGTTGAT
>probe:Drosophila_2:1640515_s_at:378:467; Interrogation_Position=3686; Antisense; GTTGATTTGTTTGTGCATTCGCTTT
>probe:Drosophila_2:1640515_s_at:521:9; Interrogation_Position=3702; Antisense; ATTCGCTTTTGGTCCACCTTCAAGT
>probe:Drosophila_2:1640515_s_at:530:711; Interrogation_Position=3720; Antisense; TTCAAGTCACCAATGCATACGCGAG
>probe:Drosophila_2:1640515_s_at:287:273; Interrogation_Position=3735; Antisense; CATACGCGAGTTTGCTGTTGAACAT
>probe:Drosophila_2:1640515_s_at:700:341; Interrogation_Position=3977; Antisense; GCTTAAGAGATTTACATGCCTGACT
>probe:Drosophila_2:1640515_s_at:244:709; Interrogation_Position=3988; Antisense; TTACATGCCTGACTAGCAAGCGTAT
>probe:Drosophila_2:1640515_s_at:94:677; Interrogation_Position=4001; Antisense; TAGCAAGCGTATACACCCCACAACG
>probe:Drosophila_2:1640515_s_at:461:309; Interrogation_Position=4018; Antisense; CCACAACGCTGATACCCTTTTATAT
>probe:Drosophila_2:1640515_s_at:629:157; Interrogation_Position=4051; Antisense; ACACACAACCCCAAAAATCACATAT
>probe:Drosophila_2:1640515_s_at:716:237; Interrogation_Position=4066; Antisense; AATCACATATACACTTGCAAACTGC

Paste this into a BLAST search page for me
GTAAAATTTATTGTGCGCGCATGTTGTGCGCGCATGTTGCAGAAACCAAAATGGCTTTTGGCTATCGATTTTTAACGATTTTTTCGAGTTGACAGTTGATGTTGATTTGTTTGTGCATTCGCTTTATTCGCTTTTGGTCCACCTTCAAGTTTCAAGTCACCAATGCATACGCGAGCATACGCGAGTTTGCTGTTGAACATGCTTAAGAGATTTACATGCCTGACTTTACATGCCTGACTAGCAAGCGTATTAGCAAGCGTATACACCCCACAACGCCACAACGCTGATACCCTTTTATATACACACAACCCCAAAAATCACATATAATCACATATACACTTGCAAACTGC

Full Affymetrix probeset data:

Annotations for 1640515_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720