FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640537_a_at:

>probe:Drosophila_2:1640537_a_at:656:699; Interrogation_Position=1046; Antisense; TTTTTGCTACGTTTATGGGCATCAT
>probe:Drosophila_2:1640537_a_at:174:595; Interrogation_Position=1061; Antisense; TGGGCATCATTCTGATTGATCGGTT
>probe:Drosophila_2:1640537_a_at:581:601; Interrogation_Position=1103; Antisense; TGTATGTATCCGACATCGCCATGAT
>probe:Drosophila_2:1640537_a_at:700:57; Interrogation_Position=1123; Antisense; ATGATCGTGACCCTGTCCATTCTGG
>probe:Drosophila_2:1640537_a_at:210:713; Interrogation_Position=1153; Antisense; TTCTTCTACTGCAAGGCGCATGGTC
>probe:Drosophila_2:1640537_a_at:253:251; Interrogation_Position=1164; Antisense; CAAGGCGCATGGTCCGGATGTGTCC
>probe:Drosophila_2:1640537_a_at:259:463; Interrogation_Position=1281; Antisense; GATTCTGCCAGCCAAGATTCGAGGA
>probe:Drosophila_2:1640537_a_at:163:253; Interrogation_Position=1293; Antisense; CAAGATTCGAGGACCGGCTGCATCG
>probe:Drosophila_2:1640537_a_at:524:303; Interrogation_Position=1306; Antisense; CCGGCTGCATCGGTGGTCACGGCTT
>probe:Drosophila_2:1640537_a_at:606:277; Interrogation_Position=1443; Antisense; CTTTGTGATTATTTTTGTGCCCGAA
>probe:Drosophila_2:1640537_a_at:48:249; Interrogation_Position=1491; Antisense; AATTGAGCGAAAGATGATGGGCCGT
>probe:Drosophila_2:1640537_a_at:88:309; Interrogation_Position=1520; Antisense; CCATGTCCTCGGTGGTCAACATCAA
>probe:Drosophila_2:1640537_a_at:653:271; Interrogation_Position=1539; Antisense; CATCAAGCCATTTCCTTTCAACATG
>probe:Drosophila_2:1640537_a_at:261:583; Interrogation_Position=1568; Antisense; TGGCGCAAGCGCAATAAATCAAAAT

Paste this into a BLAST search page for me
TTTTTGCTACGTTTATGGGCATCATTGGGCATCATTCTGATTGATCGGTTTGTATGTATCCGACATCGCCATGATATGATCGTGACCCTGTCCATTCTGGTTCTTCTACTGCAAGGCGCATGGTCCAAGGCGCATGGTCCGGATGTGTCCGATTCTGCCAGCCAAGATTCGAGGACAAGATTCGAGGACCGGCTGCATCGCCGGCTGCATCGGTGGTCACGGCTTCTTTGTGATTATTTTTGTGCCCGAAAATTGAGCGAAAGATGATGGGCCGTCCATGTCCTCGGTGGTCAACATCAACATCAAGCCATTTCCTTTCAACATGTGGCGCAAGCGCAATAAATCAAAAT

Full Affymetrix probeset data:

Annotations for 1640537_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720