FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640539_a_at:

>probe:Drosophila_2:1640539_a_at:672:235; Interrogation_Position=1108; Antisense; AATCGTGCCTTGTCCTACACAAAGC
>probe:Drosophila_2:1640539_a_at:501:197; Interrogation_Position=1187; Antisense; AACGTCAACGGCAGGCGGCTACAGC
>probe:Drosophila_2:1640539_a_at:553:213; Interrogation_Position=1226; Antisense; AAGAGCCATCTTCAGCTACCCAGGT
>probe:Drosophila_2:1640539_a_at:386:253; Interrogation_Position=1265; Antisense; CAAGCAGCTCGCGTGTTGCAGAAAT
>probe:Drosophila_2:1640539_a_at:93:395; Interrogation_Position=1285; Antisense; GAAATGCTGGAACCGGATTCCCGCT
>probe:Drosophila_2:1640539_a_at:439:179; Interrogation_Position=1312; Antisense; AAACAGCTATATGCCCTTTCGAACT
>probe:Drosophila_2:1640539_a_at:281:715; Interrogation_Position=1329; Antisense; TTCGAACTCAAGTCCGTCCATGAAG
>probe:Drosophila_2:1640539_a_at:199:211; Interrogation_Position=1351; Antisense; AAGACTGGCCTGGAAATCGGACGGA
>probe:Drosophila_2:1640539_a_at:404:223; Interrogation_Position=1375; Antisense; AAGGGTGAGCTATACCTCTACGAGC
>probe:Drosophila_2:1640539_a_at:480:333; Interrogation_Position=1404; Antisense; GCTGGACGCAGCACTGGAGTCGTAT
>probe:Drosophila_2:1640539_a_at:36:433; Interrogation_Position=1420; Antisense; GAGTCGTATACTTCAGCTTTGGGCA
>probe:Drosophila_2:1640539_a_at:296:201; Interrogation_Position=1481; Antisense; AACGCCGTAATCTGTTGCTGCAGCA
>probe:Drosophila_2:1640539_a_at:3:103; Interrogation_Position=1541; Antisense; AGAGCATTTTAAGCGCCAAGCACTT
>probe:Drosophila_2:1640539_a_at:385:609; Interrogation_Position=1604; Antisense; TGAGAACCATCACATTCCAGGGCTG

Paste this into a BLAST search page for me
AATCGTGCCTTGTCCTACACAAAGCAACGTCAACGGCAGGCGGCTACAGCAAGAGCCATCTTCAGCTACCCAGGTCAAGCAGCTCGCGTGTTGCAGAAATGAAATGCTGGAACCGGATTCCCGCTAAACAGCTATATGCCCTTTCGAACTTTCGAACTCAAGTCCGTCCATGAAGAAGACTGGCCTGGAAATCGGACGGAAAGGGTGAGCTATACCTCTACGAGCGCTGGACGCAGCACTGGAGTCGTATGAGTCGTATACTTCAGCTTTGGGCAAACGCCGTAATCTGTTGCTGCAGCAAGAGCATTTTAAGCGCCAAGCACTTTGAGAACCATCACATTCCAGGGCTG

Full Affymetrix probeset data:

Annotations for 1640539_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720