FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640610_at:

>probe:Drosophila_2:1640610_at:135:663; Interrogation_Position=1673; Antisense; TACAGCGTCAGCAAGCGGGCAGCAA
>probe:Drosophila_2:1640610_at:598:557; Interrogation_Position=1732; Antisense; GGACATGCAGTTGCTTAACCCGAGA
>probe:Drosophila_2:1640610_at:571:687; Interrogation_Position=1758; Antisense; TATATTTTGCTTCCGATGCCATGGC
>probe:Drosophila_2:1640610_at:97:69; Interrogation_Position=1778; Antisense; ATGGCTGAATTGCAATCCCTGCGGA
>probe:Drosophila_2:1640610_at:437:281; Interrogation_Position=1796; Antisense; CTGCGGATCCGACTAAACTTCATTA
>probe:Drosophila_2:1640610_at:301:689; Interrogation_Position=1826; Antisense; TATTTGTATACCTGTGCTCCGAGCA
>probe:Drosophila_2:1640610_at:74:421; Interrogation_Position=1846; Antisense; GAGCAGCATAGAGCTTCTCCAGAAT
>probe:Drosophila_2:1640610_at:467:71; Interrogation_Position=1883; Antisense; AGGGAGTACCTTTACGAGCACATTC
>probe:Drosophila_2:1640610_at:372:421; Interrogation_Position=1898; Antisense; GAGCACATTCATCTGTACTCCATAG
>probe:Drosophila_2:1640610_at:149:115; Interrogation_Position=1921; Antisense; AGCAGATTTGGCTCTTATTCAGCGA
>probe:Drosophila_2:1640610_at:427:373; Interrogation_Position=2002; Antisense; GAAGTGCAGACTGTGCCACCTAAAA
>probe:Drosophila_2:1640610_at:332:13; Interrogation_Position=2089; Antisense; ATTCAGATGTCTGGCCTGTGGAGCT
>probe:Drosophila_2:1640610_at:218:287; Interrogation_Position=2112; Antisense; CTGTGTTCCACGCTGAGTGTTTGAA
>probe:Drosophila_2:1640610_at:213:377; Interrogation_Position=2140; Antisense; GAAGCAGCCATGTCCCAAATGTGAA

Paste this into a BLAST search page for me
TACAGCGTCAGCAAGCGGGCAGCAAGGACATGCAGTTGCTTAACCCGAGATATATTTTGCTTCCGATGCCATGGCATGGCTGAATTGCAATCCCTGCGGACTGCGGATCCGACTAAACTTCATTATATTTGTATACCTGTGCTCCGAGCAGAGCAGCATAGAGCTTCTCCAGAATAGGGAGTACCTTTACGAGCACATTCGAGCACATTCATCTGTACTCCATAGAGCAGATTTGGCTCTTATTCAGCGAGAAGTGCAGACTGTGCCACCTAAAAATTCAGATGTCTGGCCTGTGGAGCTCTGTGTTCCACGCTGAGTGTTTGAAGAAGCAGCCATGTCCCAAATGTGAA

Full Affymetrix probeset data:

Annotations for 1640610_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720