FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640631_at:

>probe:Drosophila_2:1640631_at:251:683; Interrogation_Position=4165; Antisense; TATGAATGGCAAACACCTTTTCGTT
>probe:Drosophila_2:1640631_at:241:157; Interrogation_Position=4177; Antisense; ACACCTTTTCGTTTGTTAGGATGAG
>probe:Drosophila_2:1640631_at:559:285; Interrogation_Position=4204; Antisense; CGGACTAACTCACAGCGTACTTGTA
>probe:Drosophila_2:1640631_at:54:515; Interrogation_Position=4261; Antisense; GTGTTTGCACAAATCCAGCATCCGC
>probe:Drosophila_2:1640631_at:233:347; Interrogation_Position=4278; Antisense; GCATCCGCATCCGATGTACTTTATG
>probe:Drosophila_2:1640631_at:707:489; Interrogation_Position=4293; Antisense; GTACTTTATGTGTTGTCTGTGAGAA
>probe:Drosophila_2:1640631_at:570:199; Interrogation_Position=4316; Antisense; AACGCAGGGCAAATTATCGGAAGCA
>probe:Drosophila_2:1640631_at:355:409; Interrogation_Position=4387; Antisense; GACGTATAAGTAACTTGTGCACCCC
>probe:Drosophila_2:1640631_at:317:489; Interrogation_Position=4454; Antisense; GTACACCCCATGCACCAGAGTAAAA
>probe:Drosophila_2:1640631_at:47:269; Interrogation_Position=4533; Antisense; CAGGCGTTTGGCGTTGGAGAACAAT
>probe:Drosophila_2:1640631_at:106:241; Interrogation_Position=4555; Antisense; AATAAGTTCTCCAAGACACCAGCAC
>probe:Drosophila_2:1640631_at:661:681; Interrogation_Position=4595; Antisense; TATGCCACGACACAGCCATTAAATC
>probe:Drosophila_2:1640631_at:373:347; Interrogation_Position=4623; Antisense; GCATCCCTACATCCATACATGTGGA
>probe:Drosophila_2:1640631_at:489:557; Interrogation_Position=4645; Antisense; GGACTATGTGTTAAGGTCCAGCCGC

Paste this into a BLAST search page for me
TATGAATGGCAAACACCTTTTCGTTACACCTTTTCGTTTGTTAGGATGAGCGGACTAACTCACAGCGTACTTGTAGTGTTTGCACAAATCCAGCATCCGCGCATCCGCATCCGATGTACTTTATGGTACTTTATGTGTTGTCTGTGAGAAAACGCAGGGCAAATTATCGGAAGCAGACGTATAAGTAACTTGTGCACCCCGTACACCCCATGCACCAGAGTAAAACAGGCGTTTGGCGTTGGAGAACAATAATAAGTTCTCCAAGACACCAGCACTATGCCACGACACAGCCATTAAATCGCATCCCTACATCCATACATGTGGAGGACTATGTGTTAAGGTCCAGCCGC

Full Affymetrix probeset data:

Annotations for 1640631_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720