FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640643_a_at:

>probe:Drosophila_2:1640643_a_at:171:199; Interrogation_Position=2236; Antisense; AACGAGGCCTGCGAGGTTATCAACC
>probe:Drosophila_2:1640643_a_at:292:475; Interrogation_Position=2251; Antisense; GTTATCAACCGCTCCTGGCTGAGAT
>probe:Drosophila_2:1640643_a_at:119:413; Interrogation_Position=2301; Antisense; GACCGCCATGCACACGAACTGTGGA
>probe:Drosophila_2:1640643_a_at:284:537; Interrogation_Position=2360; Antisense; GGTACTGCGACAAGTGCAAGTCCAT
>probe:Drosophila_2:1640643_a_at:180:361; Interrogation_Position=2375; Antisense; GCAAGTCCATGCAGTCCGCCAAGTG
>probe:Drosophila_2:1640643_a_at:127:221; Interrogation_Position=2395; Antisense; AAGTGCTGCGTCTGCGGTCTGATCG
>probe:Drosophila_2:1640643_a_at:495:549; Interrogation_Position=2425; Antisense; GGAGTCTACGCCTGGTGCCAAGGAT
>probe:Drosophila_2:1640643_a_at:486:141; Interrogation_Position=2456; Antisense; ACGGCGGTCACATAGAGCACCTGCA
>probe:Drosophila_2:1640643_a_at:457:421; Interrogation_Position=2470; Antisense; GAGCACCTGCAGAAGTACTTTGCCA
>probe:Drosophila_2:1640643_a_at:529:489; Interrogation_Position=2484; Antisense; GTACTTTGCCAAACACTCCAAGTGC
>probe:Drosophila_2:1640643_a_at:643:211; Interrogation_Position=2503; Antisense; AAGTGCCCCAAGTGCGGACACCTTT
>probe:Drosophila_2:1640643_a_at:70:157; Interrogation_Position=2520; Antisense; ACACCTTTGCGCGTACTCATGAGAC
>probe:Drosophila_2:1640643_a_at:56:203; Interrogation_Position=2611; Antisense; AAGCCCAATAAGTACCTTGCACTAG
>probe:Drosophila_2:1640643_a_at:584:539; Interrogation_Position=2722; Antisense; GGTTTAATCGATCTTCTGCAACTTT

Paste this into a BLAST search page for me
AACGAGGCCTGCGAGGTTATCAACCGTTATCAACCGCTCCTGGCTGAGATGACCGCCATGCACACGAACTGTGGAGGTACTGCGACAAGTGCAAGTCCATGCAAGTCCATGCAGTCCGCCAAGTGAAGTGCTGCGTCTGCGGTCTGATCGGGAGTCTACGCCTGGTGCCAAGGATACGGCGGTCACATAGAGCACCTGCAGAGCACCTGCAGAAGTACTTTGCCAGTACTTTGCCAAACACTCCAAGTGCAAGTGCCCCAAGTGCGGACACCTTTACACCTTTGCGCGTACTCATGAGACAAGCCCAATAAGTACCTTGCACTAGGGTTTAATCGATCTTCTGCAACTTT

Full Affymetrix probeset data:

Annotations for 1640643_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720