FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640653_at:

>probe:Drosophila_2:1640653_at:200:525; Interrogation_Position=1241; Antisense; TAAGTGTCCAGGTGAAAAACAGCGG
>probe:Drosophila_2:1640653_at:426:179; Interrogation_Position=1257; Antisense; AAACAGCGGGACGAGGAAATCCATA
>probe:Drosophila_2:1640653_at:431:25; Interrogation_Position=1279; Antisense; ATAGATTGAATCATGCCCGAGGCCA
>probe:Drosophila_2:1640653_at:515:269; Interrogation_Position=1290; Antisense; CATGCCCGAGGCCAGTTTAACAGGC
>probe:Drosophila_2:1640653_at:696:657; Interrogation_Position=1307; Antisense; TAACAGGCCGGAACTTTTGAGAGAA
>probe:Drosophila_2:1640653_at:40:389; Interrogation_Position=1329; Antisense; GAAAAACCTAATGCGAACGGAGAGA
>probe:Drosophila_2:1640653_at:599:195; Interrogation_Position=1344; Antisense; AACGGAGAGAGCAAACGAGATTGTC
>probe:Drosophila_2:1640653_at:225:429; Interrogation_Position=1360; Antisense; GAGATTGTCGCAATGACCGTTCTGT
>probe:Drosophila_2:1640653_at:188:503; Interrogation_Position=1366; Antisense; GTCGCAATGACCGTTCTGTGTCGAA
>probe:Drosophila_2:1640653_at:690:411; Interrogation_Position=1374; Antisense; GACCGTTCTGTGTCGAAGAAAACTT
>probe:Drosophila_2:1640653_at:22:389; Interrogation_Position=1391; Antisense; GAAAACTTCCCAGAATGATCTTGTT
>probe:Drosophila_2:1640653_at:580:603; Interrogation_Position=1406; Antisense; TGATCTTGTTTTGCAATCATCTAAT
>probe:Drosophila_2:1640653_at:622:239; Interrogation_Position=1428; Antisense; AATAAATATTCAGGACTCGACAATG
>probe:Drosophila_2:1640653_at:581:555; Interrogation_Position=1440; Antisense; GGACTCGACAATGAAGGATCGGAAT

Paste this into a BLAST search page for me
TAAGTGTCCAGGTGAAAAACAGCGGAAACAGCGGGACGAGGAAATCCATAATAGATTGAATCATGCCCGAGGCCACATGCCCGAGGCCAGTTTAACAGGCTAACAGGCCGGAACTTTTGAGAGAAGAAAAACCTAATGCGAACGGAGAGAAACGGAGAGAGCAAACGAGATTGTCGAGATTGTCGCAATGACCGTTCTGTGTCGCAATGACCGTTCTGTGTCGAAGACCGTTCTGTGTCGAAGAAAACTTGAAAACTTCCCAGAATGATCTTGTTTGATCTTGTTTTGCAATCATCTAATAATAAATATTCAGGACTCGACAATGGGACTCGACAATGAAGGATCGGAAT

Full Affymetrix probeset data:

Annotations for 1640653_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720