FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640729_s_at:

>probe:Drosophila_2:1640729_s_at:228:105; Interrogation_Position=1129; Antisense; AGACTTTGCCAGATCATATGCCAGA
>probe:Drosophila_2:1640729_s_at:85:559; Interrogation_Position=1175; Antisense; GGAAAAGCAAAGTCTTAGGCCCAAT
>probe:Drosophila_2:1640729_s_at:474:255; Interrogation_Position=1204; Antisense; CAAATGTAGTTTGGGTCTCGTGCGA
>probe:Drosophila_2:1640729_s_at:224:387; Interrogation_Position=1233; Antisense; GAAAATCCCGCTGATGTCGAGAACA
>probe:Drosophila_2:1640729_s_at:551:131; Interrogation_Position=1265; Antisense; ACGCGACTACTATCCCCGAATGGGA
>probe:Drosophila_2:1640729_s_at:54:255; Interrogation_Position=1280; Antisense; CCGAATGGGATTTCCTCGTTACTAT
>probe:Drosophila_2:1640729_s_at:119:21; Interrogation_Position=1328; Antisense; ATATATACCGCCCATTGTTGCTGTT
>probe:Drosophila_2:1640729_s_at:200:467; Interrogation_Position=1344; Antisense; GTTGCTGTTCAATTTACCGTTGAAA
>probe:Drosophila_2:1640729_s_at:212:391; Interrogation_Position=1365; Antisense; GAAACCGGCGTTTTGATCAACATTG
>probe:Drosophila_2:1640729_s_at:535:615; Interrogation_Position=1388; Antisense; TGAATGTAAAGCTTGGGCCCGCAAC
>probe:Drosophila_2:1640729_s_at:48:729; Interrogation_Position=1400; Antisense; TTGGGCCCGCAACATTAATCACGAC
>probe:Drosophila_2:1640729_s_at:570:239; Interrogation_Position=1416; Antisense; AATCACGACCGTTCAGACAGAAGAG
>probe:Drosophila_2:1640729_s_at:53:99; Interrogation_Position=1437; Antisense; AGAGGATCCGTTCACTTCGAGTTGA
>probe:Drosophila_2:1640729_s_at:625:485; Interrogation_Position=1624; Antisense; GTAGTAGCGCAGAAACGTCAGGTTA

Paste this into a BLAST search page for me
AGACTTTGCCAGATCATATGCCAGAGGAAAAGCAAAGTCTTAGGCCCAATCAAATGTAGTTTGGGTCTCGTGCGAGAAAATCCCGCTGATGTCGAGAACAACGCGACTACTATCCCCGAATGGGACCGAATGGGATTTCCTCGTTACTATATATATACCGCCCATTGTTGCTGTTGTTGCTGTTCAATTTACCGTTGAAAGAAACCGGCGTTTTGATCAACATTGTGAATGTAAAGCTTGGGCCCGCAACTTGGGCCCGCAACATTAATCACGACAATCACGACCGTTCAGACAGAAGAGAGAGGATCCGTTCACTTCGAGTTGAGTAGTAGCGCAGAAACGTCAGGTTA

Full Affymetrix probeset data:

Annotations for 1640729_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720