FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640739_at:

>probe:Drosophila_2:1640739_at:548:587; Interrogation_Position=5411; Antisense; TGGACCTGGTGGAGTACTCGTCCAA
>probe:Drosophila_2:1640739_at:355:371; Interrogation_Position=5439; Antisense; GAAGGGAGCTATTCCCGTACTGCCG
>probe:Drosophila_2:1640739_at:344:489; Interrogation_Position=5455; Antisense; GTACTGCCGCTGTATTTAGCCTGGT
>probe:Drosophila_2:1640739_at:635:17; Interrogation_Position=5468; Antisense; ATTTAGCCTGGTTCTGTGCCTTCTG
>probe:Drosophila_2:1640739_at:45:627; Interrogation_Position=5484; Antisense; TGCCTTCTGCAATGTGGTTTTCCCA
>probe:Drosophila_2:1640739_at:440:557; Interrogation_Position=5530; Antisense; GGACTATTTTGCCTCTGCGTGGGCA
>probe:Drosophila_2:1640739_at:697:399; Interrogation_Position=5575; Antisense; GACAGCGCTCGTGCAAGGATCGGAT
>probe:Drosophila_2:1640739_at:689:543; Interrogation_Position=5591; Antisense; GGATCGGATCATTCATCATCAACAT
>probe:Drosophila_2:1640739_at:372:255; Interrogation_Position=5610; Antisense; CAACATTATCGTGGCCGTATCGCAG
>probe:Drosophila_2:1640739_at:454:623; Interrogation_Position=5641; Antisense; TGCGTGCTCTTCTGCTTCGTGGGAT
>probe:Drosophila_2:1640739_at:3:575; Interrogation_Position=5808; Antisense; GGCGGACAAGACATAGTCCTCCGAT
>probe:Drosophila_2:1640739_at:195:631; Interrogation_Position=5827; Antisense; TCCGATCCCGGTTACAACTAAGTTG
>probe:Drosophila_2:1640739_at:57:259; Interrogation_Position=5910; Antisense; CACTTCCACATGAACTTCCAGGTTA
>probe:Drosophila_2:1640739_at:708:131; Interrogation_Position=5946; Antisense; ACGGAACTTCCCTTAAACATGAGAT

Paste this into a BLAST search page for me
TGGACCTGGTGGAGTACTCGTCCAAGAAGGGAGCTATTCCCGTACTGCCGGTACTGCCGCTGTATTTAGCCTGGTATTTAGCCTGGTTCTGTGCCTTCTGTGCCTTCTGCAATGTGGTTTTCCCAGGACTATTTTGCCTCTGCGTGGGCAGACAGCGCTCGTGCAAGGATCGGATGGATCGGATCATTCATCATCAACATCAACATTATCGTGGCCGTATCGCAGTGCGTGCTCTTCTGCTTCGTGGGATGGCGGACAAGACATAGTCCTCCGATTCCGATCCCGGTTACAACTAAGTTGCACTTCCACATGAACTTCCAGGTTAACGGAACTTCCCTTAAACATGAGAT

Full Affymetrix probeset data:

Annotations for 1640739_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720