FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640754_at:

>probe:Drosophila_2:1640754_at:702:131; Interrogation_Position=1863; Antisense; ACACGACGTAGCCTTTTAAAGCACT
>probe:Drosophila_2:1640754_at:575:165; Interrogation_Position=1956; Antisense; AAATCGTTGGCGCAGACTTCTTCAT
>probe:Drosophila_2:1640754_at:606:103; Interrogation_Position=1969; Antisense; AGACTTCTTCATCGATGCGCATACA
>probe:Drosophila_2:1640754_at:212:679; Interrogation_Position=2008; Antisense; TAGTAAAACATCAGCGCCACAATTC
>probe:Drosophila_2:1640754_at:159:679; Interrogation_Position=2065; Antisense; TAGTGTGCTAAGTGATCCCGAGGTT
>probe:Drosophila_2:1640754_at:306:467; Interrogation_Position=2087; Antisense; GTTGATCAGACTTTTAGCTCCACGG
>probe:Drosophila_2:1640754_at:376:309; Interrogation_Position=2115; Antisense; CCACGCACAGCAGCGACATGTATAT
>probe:Drosophila_2:1640754_at:712:389; Interrogation_Position=2196; Antisense; GAAACATCTCCAAAGCGGCTCGTAG
>probe:Drosophila_2:1640754_at:627:315; Interrogation_Position=2232; Antisense; GCCTAGTAGCGTTTCCATTAGTCTA
>probe:Drosophila_2:1640754_at:326:191; Interrogation_Position=2294; Antisense; AACTTAGCCGTATGCTGCCATTGTA
>probe:Drosophila_2:1640754_at:497:315; Interrogation_Position=2310; Antisense; GCCATTGTATCATCGTCAGTTTGTA
>probe:Drosophila_2:1640754_at:657:343; Interrogation_Position=2356; Antisense; GCATTCTTGTTATTAGTCACCCTCA
>probe:Drosophila_2:1640754_at:370:727; Interrogation_Position=2387; Antisense; TTGTATTACATCCAAATCCCCATCT
>probe:Drosophila_2:1640754_at:461:45; Interrogation_Position=2402; Antisense; ATCCCCATCTGTGTTTAGCCTAAGT

Paste this into a BLAST search page for me
ACACGACGTAGCCTTTTAAAGCACTAAATCGTTGGCGCAGACTTCTTCATAGACTTCTTCATCGATGCGCATACATAGTAAAACATCAGCGCCACAATTCTAGTGTGCTAAGTGATCCCGAGGTTGTTGATCAGACTTTTAGCTCCACGGCCACGCACAGCAGCGACATGTATATGAAACATCTCCAAAGCGGCTCGTAGGCCTAGTAGCGTTTCCATTAGTCTAAACTTAGCCGTATGCTGCCATTGTAGCCATTGTATCATCGTCAGTTTGTAGCATTCTTGTTATTAGTCACCCTCATTGTATTACATCCAAATCCCCATCTATCCCCATCTGTGTTTAGCCTAAGT

Full Affymetrix probeset data:

Annotations for 1640754_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720