FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640770_a_at:

>probe:Drosophila_2:1640770_a_at:482:455; Interrogation_Position=2765; Antisense; GATACTCTACGATTCTGACTTTGTC
>probe:Drosophila_2:1640770_a_at:508:609; Interrogation_Position=2780; Antisense; TGACTTTGTCAACGCCTTGCTGAAC
>probe:Drosophila_2:1640770_a_at:473:611; Interrogation_Position=2800; Antisense; TGAACTTTGCCAACACGCTGAACGC
>probe:Drosophila_2:1640770_a_at:653:315; Interrogation_Position=2823; Antisense; GCCTACGGGCTGAGTGACACCGAAA
>probe:Drosophila_2:1640770_a_at:547:65; Interrogation_Position=2865; Antisense; ATGGTGCTGCTTGCCTCGGATCGAG
>probe:Drosophila_2:1640770_a_at:672:215; Interrogation_Position=3018; Antisense; AAGATACCCGAGCTGAGATCCTTGG
>probe:Drosophila_2:1640770_a_at:547:651; Interrogation_Position=3057; Antisense; TCACACCTAGACTGGCTACGGATGA
>probe:Drosophila_2:1640770_a_at:200:547; Interrogation_Position=3076; Antisense; GGATGAACTGGACCAAGCTGCGCCT
>probe:Drosophila_2:1640770_a_at:407:717; Interrogation_Position=3123; Antisense; TTCGACATCCCGAAGGCTGACGATG
>probe:Drosophila_2:1640770_a_at:567:485; Interrogation_Position=3152; Antisense; GTAGGATGTGGAGCCAACCCCGCGA
>probe:Drosophila_2:1640770_a_at:171:463; Interrogation_Position=3175; Antisense; GATTCCAGGGCCGTGCAAAGCAAAC
>probe:Drosophila_2:1640770_a_at:59:523; Interrogation_Position=3266; Antisense; GGGCCGCAGATCAGATACACGTCTA
>probe:Drosophila_2:1640770_a_at:612:663; Interrogation_Position=3281; Antisense; TACACGTCTACTCAGCATTACCGGA
>probe:Drosophila_2:1640770_a_at:439:505; Interrogation_Position=3312; Antisense; GTCCACTAAGCCTATATGCATACTA

Paste this into a BLAST search page for me
GATACTCTACGATTCTGACTTTGTCTGACTTTGTCAACGCCTTGCTGAACTGAACTTTGCCAACACGCTGAACGCGCCTACGGGCTGAGTGACACCGAAAATGGTGCTGCTTGCCTCGGATCGAGAAGATACCCGAGCTGAGATCCTTGGTCACACCTAGACTGGCTACGGATGAGGATGAACTGGACCAAGCTGCGCCTTTCGACATCCCGAAGGCTGACGATGGTAGGATGTGGAGCCAACCCCGCGAGATTCCAGGGCCGTGCAAAGCAAACGGGCCGCAGATCAGATACACGTCTATACACGTCTACTCAGCATTACCGGAGTCCACTAAGCCTATATGCATACTA

Full Affymetrix probeset data:

Annotations for 1640770_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720