FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640774_a_at:

>probe:Drosophila_2:1640774_a_at:548:657; Interrogation_Position=2839; Antisense; TAACCAGATTTATGCTTCGGATTTC
>probe:Drosophila_2:1640774_a_at:695:221; Interrogation_Position=2879; Antisense; AAGGGACTTGTATGTTGTGCTGTAA
>probe:Drosophila_2:1640774_a_at:575:513; Interrogation_Position=2906; Antisense; GTGTTGTGTTTATATACCCATAGCA
>probe:Drosophila_2:1640774_a_at:294:389; Interrogation_Position=2967; Antisense; GAAACAGAAGCGTTCGACTTAGAAT
>probe:Drosophila_2:1640774_a_at:622:107; Interrogation_Position=2995; Antisense; AGAAGCCAATTTTTGTGCATTACAA
>probe:Drosophila_2:1640774_a_at:370:619; Interrogation_Position=3010; Antisense; TGCATTACAATGGTTCACCTGTCCC
>probe:Drosophila_2:1640774_a_at:2:649; Interrogation_Position=3024; Antisense; TCACCTGTCCCGATGTAGATAATTG
>probe:Drosophila_2:1640774_a_at:194:655; Interrogation_Position=3043; Antisense; TAATTGCAACTTGATCCACTCCAGT
>probe:Drosophila_2:1640774_a_at:129:725; Interrogation_Position=3053; Antisense; TTGATCCACTCCAGTTTCACTGAAC
>probe:Drosophila_2:1640774_a_at:128:93; Interrogation_Position=3065; Antisense; AGTTTCACTGAACTGCTGTCCAGGC
>probe:Drosophila_2:1640774_a_at:103:623; Interrogation_Position=3078; Antisense; TGCTGTCCAGGCCTAAGCTACAAAA
>probe:Drosophila_2:1640774_a_at:567:181; Interrogation_Position=3100; Antisense; AAAACTATACTCTTAACGACACACA
>probe:Drosophila_2:1640774_a_at:237:137; Interrogation_Position=3115; Antisense; ACGACACACACTTTCAATCTGTTGA
>probe:Drosophila_2:1640774_a_at:278:369; Interrogation_Position=3145; Antisense; GAATGCGATGCAATGAACTCGAAAC

Paste this into a BLAST search page for me
TAACCAGATTTATGCTTCGGATTTCAAGGGACTTGTATGTTGTGCTGTAAGTGTTGTGTTTATATACCCATAGCAGAAACAGAAGCGTTCGACTTAGAATAGAAGCCAATTTTTGTGCATTACAATGCATTACAATGGTTCACCTGTCCCTCACCTGTCCCGATGTAGATAATTGTAATTGCAACTTGATCCACTCCAGTTTGATCCACTCCAGTTTCACTGAACAGTTTCACTGAACTGCTGTCCAGGCTGCTGTCCAGGCCTAAGCTACAAAAAAAACTATACTCTTAACGACACACAACGACACACACTTTCAATCTGTTGAGAATGCGATGCAATGAACTCGAAAC

Full Affymetrix probeset data:

Annotations for 1640774_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720