FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640796_a_at:

>probe:Drosophila_2:1640796_a_at:159:211; Interrogation_Position=2746; Antisense; AAGAATTAGCATTCACTGCGTCGAA
>probe:Drosophila_2:1640796_a_at:210:623; Interrogation_Position=2762; Antisense; TGCGTCGAAAGGCATACACCCACCA
>probe:Drosophila_2:1640796_a_at:321:157; Interrogation_Position=2777; Antisense; ACACCCACCACCTTTATGATTTATA
>probe:Drosophila_2:1640796_a_at:4:663; Interrogation_Position=2812; Antisense; TAAACTTGACCAATTACGGCCAATT
>probe:Drosophila_2:1640796_a_at:715:579; Interrogation_Position=2829; Antisense; GGCCAATTCATTTTGCACATACTTG
>probe:Drosophila_2:1640796_a_at:67:203; Interrogation_Position=2893; Antisense; AACCTTTTTTACGAGCTCTGATAAT
>probe:Drosophila_2:1640796_a_at:695:171; Interrogation_Position=2965; Antisense; AAAGTTCGTTCCTAATTCTGGACTG
>probe:Drosophila_2:1640796_a_at:660:713; Interrogation_Position=2980; Antisense; TTCTGGACTGTCCTTCTTCGTCGAA
>probe:Drosophila_2:1640796_a_at:451:23; Interrogation_Position=2995; Antisense; CTTCGTCGAAGCTAAATCACTCATT
>probe:Drosophila_2:1640796_a_at:203:91; Interrogation_Position=3072; Antisense; AGTAGTATTTTCTTGCGATTCTGAG
>probe:Drosophila_2:1640796_a_at:551:293; Interrogation_Position=3087; Antisense; CGATTCTGAGACAAGGACACTGCCT
>probe:Drosophila_2:1640796_a_at:437:559; Interrogation_Position=3101; Antisense; GGACACTGCCTAATTTATTGCACTA
>probe:Drosophila_2:1640796_a_at:639:509; Interrogation_Position=3159; Antisense; GGACTTTCTAGGCTTACATTTTGTA
>probe:Drosophila_2:1640796_a_at:517:665; Interrogation_Position=3196; Antisense; TACTCAGTATTTAAGGTCGTCGGCA

Paste this into a BLAST search page for me
AAGAATTAGCATTCACTGCGTCGAATGCGTCGAAAGGCATACACCCACCAACACCCACCACCTTTATGATTTATATAAACTTGACCAATTACGGCCAATTGGCCAATTCATTTTGCACATACTTGAACCTTTTTTACGAGCTCTGATAATAAAGTTCGTTCCTAATTCTGGACTGTTCTGGACTGTCCTTCTTCGTCGAACTTCGTCGAAGCTAAATCACTCATTAGTAGTATTTTCTTGCGATTCTGAGCGATTCTGAGACAAGGACACTGCCTGGACACTGCCTAATTTATTGCACTAGGACTTTCTAGGCTTACATTTTGTATACTCAGTATTTAAGGTCGTCGGCA

Full Affymetrix probeset data:

Annotations for 1640796_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720