FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640825_a_at:

>probe:Drosophila_2:1640825_a_at:651:31; Interrogation_Position=2847; Antisense; ATAATTTTAGATGTTTGCCCAAACT
>probe:Drosophila_2:1640825_a_at:619:613; Interrogation_Position=2890; Antisense; TGAAGCCCCTAACCAAAAAGATACA
>probe:Drosophila_2:1640825_a_at:674:245; Interrogation_Position=2951; Antisense; GAGTCCCAAACTCTATTTAATTTGC
>probe:Drosophila_2:1640825_a_at:438:5; Interrogation_Position=2976; Antisense; ATTGAGATTAGATGCCCCTTTGTTC
>probe:Drosophila_2:1640825_a_at:89:367; Interrogation_Position=3050; Antisense; TCTAGTGTTAAGCAACGGAACCCCT
>probe:Drosophila_2:1640825_a_at:28:205; Interrogation_Position=3085; Antisense; AAGCCAAATAGCCATCCCAAAGATC
>probe:Drosophila_2:1640825_a_at:645:95; Interrogation_Position=3105; Antisense; AGATCATATAGTCGCTCCTAGTTCC
>probe:Drosophila_2:1640825_a_at:595:93; Interrogation_Position=3136; Antisense; AGTTCCCCGTCGTATATATCGTATA
>probe:Drosophila_2:1640825_a_at:476:215; Interrogation_Position=3181; Antisense; CAAGATTGTAAACACCTAAGGCCAA
>probe:Drosophila_2:1640825_a_at:267:253; Interrogation_Position=3234; Antisense; CAAGCAGTAGCAGTTTTTAAGGAGT
>probe:Drosophila_2:1640825_a_at:192:89; Interrogation_Position=3264; Antisense; AGTCGTATAGATCCGCATATGGCAT
>probe:Drosophila_2:1640825_a_at:342:569; Interrogation_Position=3284; Antisense; GGCATATACCATATTACTGTCTGTA
>probe:Drosophila_2:1640825_a_at:82:59; Interrogation_Position=3322; Antisense; ATGTACATGTATATCCCCACTAAAG
>probe:Drosophila_2:1640825_a_at:359:679; Interrogation_Position=3333; Antisense; TATCCCCACTAAAGAGCCCCGTATA

Paste this into a BLAST search page for me
ATAATTTTAGATGTTTGCCCAAACTTGAAGCCCCTAACCAAAAAGATACAGAGTCCCAAACTCTATTTAATTTGCATTGAGATTAGATGCCCCTTTGTTCTCTAGTGTTAAGCAACGGAACCCCTAAGCCAAATAGCCATCCCAAAGATCAGATCATATAGTCGCTCCTAGTTCCAGTTCCCCGTCGTATATATCGTATACAAGATTGTAAACACCTAAGGCCAACAAGCAGTAGCAGTTTTTAAGGAGTAGTCGTATAGATCCGCATATGGCATGGCATATACCATATTACTGTCTGTAATGTACATGTATATCCCCACTAAAGTATCCCCACTAAAGAGCCCCGTATA

Full Affymetrix probeset data:

Annotations for 1640825_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720