FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640844_s_at:

>probe:Drosophila_2:1640844_s_at:611:107; Interrogation_Position=1260; Antisense; AGAACCTCTGGTTCAAGGCCCACTA
>probe:Drosophila_2:1640844_s_at:471:585; Interrogation_Position=1326; Antisense; TGGACAAGTACCGTCTGCGCAAGAA
>probe:Drosophila_2:1640844_s_at:213:211; Interrogation_Position=1346; Antisense; AAGAAGTATCCCCTGCCCAAGACGA
>probe:Drosophila_2:1640844_s_at:587:75; Interrogation_Position=1383; Antisense; AGGAGACGGTCTACTGCTTCAAGGA
>probe:Drosophila_2:1640844_s_at:516:651; Interrogation_Position=1401; Antisense; TCAAGGAGAAGTCGCGCAACGCTCT
>probe:Drosophila_2:1640844_s_at:129:201; Interrogation_Position=1418; Antisense; AACGCTCTCAAGGACTGCTACCTGA
>probe:Drosophila_2:1640844_s_at:277:135; Interrogation_Position=1475; Antisense; ACGCTGGCCAAGAAGACCGGGCTCA
>probe:Drosophila_2:1640844_s_at:690:109; Interrogation_Position=1527; Antisense; AGAATCGTCGACAGCGGGATCGCAC
>probe:Drosophila_2:1640844_s_at:221:321; Interrogation_Position=1552; Antisense; GCCCCAGCAAAGACCGGACATCATG
>probe:Drosophila_2:1640844_s_at:596:401; Interrogation_Position=1568; Antisense; GACATCATGTCGGTGCTGCCCGTGG
>probe:Drosophila_2:1640844_s_at:466:589; Interrogation_Position=1599; Antisense; TGGATGGCAATGGATTCCCGCGCAT
>probe:Drosophila_2:1640844_s_at:337:233; Interrogation_Position=1628; Antisense; AATGCTCCAAGCTATTATCCCGAAA
>probe:Drosophila_2:1640844_s_at:100:169; Interrogation_Position=1758; Antisense; AAATGGCCATCTTTGTTAGCTCTAG
>probe:Drosophila_2:1640844_s_at:155:201; Interrogation_Position=1787; Antisense; AACCAATTTTTGCTTTATGTACTGT

Paste this into a BLAST search page for me
AGAACCTCTGGTTCAAGGCCCACTATGGACAAGTACCGTCTGCGCAAGAAAAGAAGTATCCCCTGCCCAAGACGAAGGAGACGGTCTACTGCTTCAAGGATCAAGGAGAAGTCGCGCAACGCTCTAACGCTCTCAAGGACTGCTACCTGAACGCTGGCCAAGAAGACCGGGCTCAAGAATCGTCGACAGCGGGATCGCACGCCCCAGCAAAGACCGGACATCATGGACATCATGTCGGTGCTGCCCGTGGTGGATGGCAATGGATTCCCGCGCATAATGCTCCAAGCTATTATCCCGAAAAAATGGCCATCTTTGTTAGCTCTAGAACCAATTTTTGCTTTATGTACTGT

Full Affymetrix probeset data:

Annotations for 1640844_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720