FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640862_a_at:

>probe:Drosophila_2:1640862_a_at:199:509; Interrogation_Position=1435; Antisense; GTGCTGCACCAAAATGTCTGCCAAT
>probe:Drosophila_2:1640862_a_at:292:499; Interrogation_Position=1450; Antisense; GTCTGCCAATTGTTACCAACCTATC
>probe:Drosophila_2:1640862_a_at:85:671; Interrogation_Position=1486; Antisense; TACGGCTATGTGTCGCTGCTAAAGA
>probe:Drosophila_2:1640862_a_at:370:689; Interrogation_Position=1512; Antisense; TATTTACCATATTGACGAGCCGCAG
>probe:Drosophila_2:1640862_a_at:271:303; Interrogation_Position=1531; Antisense; CCGCAGGCTCTGTTTGAATTCGTAC
>probe:Drosophila_2:1640862_a_at:9:363; Interrogation_Position=1546; Antisense; GAATTCGTACATCCTAATCGAGCGG
>probe:Drosophila_2:1640862_a_at:351:29; Interrogation_Position=1583; Antisense; ATACTCGCTGCAAGACGGTTTCATT
>probe:Drosophila_2:1640862_a_at:713:507; Interrogation_Position=1627; Antisense; GTGCTGCACGGAATCGGCGGATACT
>probe:Drosophila_2:1640862_a_at:322:573; Interrogation_Position=1642; Antisense; GGCGGATACTTTGATACCCATTTGT
>probe:Drosophila_2:1640862_a_at:365:39; Interrogation_Position=1675; Antisense; ATCTGCCTAAGCATCAATCCTCTGA
>probe:Drosophila_2:1640862_a_at:567:635; Interrogation_Position=1739; Antisense; TCGCAACGCGTCCAAGAACTCTGAG
>probe:Drosophila_2:1640862_a_at:120:403; Interrogation_Position=1773; Antisense; GACTATATCCATCCAGTTTTGGCGA
>probe:Drosophila_2:1640862_a_at:626:349; Interrogation_Position=1830; Antisense; GCAGGTGGTCAATTCTCCAGACGAT
>probe:Drosophila_2:1640862_a_at:474:727; Interrogation_Position=1854; Antisense; TTGGGAGCACCATAACACACGCGGG

Paste this into a BLAST search page for me
GTGCTGCACCAAAATGTCTGCCAATGTCTGCCAATTGTTACCAACCTATCTACGGCTATGTGTCGCTGCTAAAGATATTTACCATATTGACGAGCCGCAGCCGCAGGCTCTGTTTGAATTCGTACGAATTCGTACATCCTAATCGAGCGGATACTCGCTGCAAGACGGTTTCATTGTGCTGCACGGAATCGGCGGATACTGGCGGATACTTTGATACCCATTTGTATCTGCCTAAGCATCAATCCTCTGATCGCAACGCGTCCAAGAACTCTGAGGACTATATCCATCCAGTTTTGGCGAGCAGGTGGTCAATTCTCCAGACGATTTGGGAGCACCATAACACACGCGGG

Full Affymetrix probeset data:

Annotations for 1640862_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720