FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640867_s_at:

>probe:Drosophila_2:1640867_s_at:619:213; Interrogation_Position=3295; Antisense; AAGATGAAACGGACAACCTGCAGAA
>probe:Drosophila_2:1640867_s_at:428:73; Interrogation_Position=3362; Antisense; AGGACAATTCAAGCCTGGTTTTTGA
>probe:Drosophila_2:1640867_s_at:216:611; Interrogation_Position=3416; Antisense; TGAAGTGTCCTTTAGGGTGAATCCT
>probe:Drosophila_2:1640867_s_at:514:35; Interrogation_Position=3446; Antisense; ATCTTCGAAAGATCTAAGGCTTGCA
>probe:Drosophila_2:1640867_s_at:131:233; Interrogation_Position=3477; Antisense; AATCCTACAAATCATACTACACTCG
>probe:Drosophila_2:1640867_s_at:85:695; Interrogation_Position=3550; Antisense; TTTACCAAAATTGCACCAAAGGCGT
>probe:Drosophila_2:1640867_s_at:668:111; Interrogation_Position=3588; Antisense; AGCAGCTACTCGAATTTACTTTTAG
>probe:Drosophila_2:1640867_s_at:662:211; Interrogation_Position=3680; Antisense; AAGACTCGGTTGTATTTGCTGTTGT
>probe:Drosophila_2:1640867_s_at:558:489; Interrogation_Position=3715; Antisense; GTACTGATCTTTGTAGTATTCGCAG
>probe:Drosophila_2:1640867_s_at:459:481; Interrogation_Position=3730; Antisense; GTATTCGCAGTTTTATACTCGCTAA
>probe:Drosophila_2:1640867_s_at:554:243; Interrogation_Position=3754; Antisense; AATTATACTCGTAGCCCATAAACAT
>probe:Drosophila_2:1640867_s_at:311:231; Interrogation_Position=3780; Antisense; AATGTTCTATCTTAGCGTTAGTTGC
>probe:Drosophila_2:1640867_s_at:461:675; Interrogation_Position=3792; Antisense; TAGCGTTAGTTGCATGCCGCAGTGC
>probe:Drosophila_2:1640867_s_at:93:51; Interrogation_Position=3805; Antisense; ATGCCGCAGTGCCTTATGAAACAAA

Paste this into a BLAST search page for me
AAGATGAAACGGACAACCTGCAGAAAGGACAATTCAAGCCTGGTTTTTGATGAAGTGTCCTTTAGGGTGAATCCTATCTTCGAAAGATCTAAGGCTTGCAAATCCTACAAATCATACTACACTCGTTTACCAAAATTGCACCAAAGGCGTAGCAGCTACTCGAATTTACTTTTAGAAGACTCGGTTGTATTTGCTGTTGTGTACTGATCTTTGTAGTATTCGCAGGTATTCGCAGTTTTATACTCGCTAAAATTATACTCGTAGCCCATAAACATAATGTTCTATCTTAGCGTTAGTTGCTAGCGTTAGTTGCATGCCGCAGTGCATGCCGCAGTGCCTTATGAAACAAA

Full Affymetrix probeset data:

Annotations for 1640867_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720