FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640870_s_at:

>probe:Drosophila_2:1640870_s_at:664:691; Interrogation_Position=1313; Antisense; TTACGGCGACCAATCCCTCAATATT
>probe:Drosophila_2:1640870_s_at:547:243; Interrogation_Position=1332; Antisense; AATATTGCCGCATTGGTGCAGCGCG
>probe:Drosophila_2:1640870_s_at:98:511; Interrogation_Position=1347; Antisense; GTGCAGCGCGGAATGGCCTTGCAAT
>probe:Drosophila_2:1640870_s_at:105:371; Interrogation_Position=1357; Antisense; GAATGGCCTTGCAATTAGAGCTTAA
>probe:Drosophila_2:1640870_s_at:640:421; Interrogation_Position=1392; Antisense; GAGAATACTGTCTACGAAGCGTTGA
>probe:Drosophila_2:1640870_s_at:87:375; Interrogation_Position=1407; Antisense; GAAGCGTTGACCAAGGCACTAGATC
>probe:Drosophila_2:1640870_s_at:702:565; Interrogation_Position=1421; Antisense; GGCACTAGATCCTTCTTTCAAGGCA
>probe:Drosophila_2:1640870_s_at:153:549; Interrogation_Position=1454; Antisense; GGAGGTGGCCTCATCGTACAACAAC
>probe:Drosophila_2:1640870_s_at:152:99; Interrogation_Position=1531; Antisense; AGACGAAAGGAGCTCCTCTGACCCA
>probe:Drosophila_2:1640870_s_at:369:641; Interrogation_Position=1547; Antisense; TCTGACCCAACCAAGTGCCGTGCAT
>probe:Drosophila_2:1640870_s_at:169:299; Interrogation_Position=1578; Antisense; CGCTTTGTTTACTACTCCTTGGATG
>probe:Drosophila_2:1640870_s_at:494:627; Interrogation_Position=1593; Antisense; TCCTTGGATGTCTACTCGGTCGTGG
>probe:Drosophila_2:1640870_s_at:663:659; Interrogation_Position=1621; Antisense; TAAGCCTGCTACTACCTGTGATCAC
>probe:Drosophila_2:1640870_s_at:229:285; Interrogation_Position=1636; Antisense; CTGTGATCACGCTCTTGGGACTAAT

Paste this into a BLAST search page for me
TTACGGCGACCAATCCCTCAATATTAATATTGCCGCATTGGTGCAGCGCGGTGCAGCGCGGAATGGCCTTGCAATGAATGGCCTTGCAATTAGAGCTTAAGAGAATACTGTCTACGAAGCGTTGAGAAGCGTTGACCAAGGCACTAGATCGGCACTAGATCCTTCTTTCAAGGCAGGAGGTGGCCTCATCGTACAACAACAGACGAAAGGAGCTCCTCTGACCCATCTGACCCAACCAAGTGCCGTGCATCGCTTTGTTTACTACTCCTTGGATGTCCTTGGATGTCTACTCGGTCGTGGTAAGCCTGCTACTACCTGTGATCACCTGTGATCACGCTCTTGGGACTAAT

Full Affymetrix probeset data:

Annotations for 1640870_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720