FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640888_a_at:

>probe:Drosophila_2:1640888_a_at:514:433; Interrogation_Position=2302; Antisense; GAGGGAGGCTAGATTGCCCACCACT
>probe:Drosophila_2:1640888_a_at:650:23; Interrogation_Position=2399; Antisense; ATATCCACCATTACATTGCTCTGCT
>probe:Drosophila_2:1640888_a_at:158:431; Interrogation_Position=2464; Antisense; GAGTATGCAGGCCAAGCCGTCTATA
>probe:Drosophila_2:1640888_a_at:51:25; Interrogation_Position=2486; Antisense; ATATGGCATGCCCTGTACTTCTGGT
>probe:Drosophila_2:1640888_a_at:141:599; Interrogation_Position=2547; Antisense; TGTCCCTGTACAGCTCCAGTATAAA
>probe:Drosophila_2:1640888_a_at:351:607; Interrogation_Position=2572; Antisense; TGATGAGTCCAAGCGACCACTGGTA
>probe:Drosophila_2:1640888_a_at:423:581; Interrogation_Position=2592; Antisense; TGGTAATCTTTCGATTGGTTCCCCG
>probe:Drosophila_2:1640888_a_at:167:539; Interrogation_Position=2608; Antisense; GGTTCCCCGGGAATATTGGTGCGAT
>probe:Drosophila_2:1640888_a_at:354:397; Interrogation_Position=2666; Antisense; GACAATGTGGCTCTGACTGGCATGA
>probe:Drosophila_2:1640888_a_at:377:161; Interrogation_Position=2690; Antisense; AAATTCTTTCGGCTAACACGCGGCG
>probe:Drosophila_2:1640888_a_at:73:467; Interrogation_Position=2714; Antisense; GTTGTCATTTCGGTGGCCGGCACAA
>probe:Drosophila_2:1640888_a_at:512:505; Interrogation_Position=2741; Antisense; GTGACCTACGAACTCATTTTGCTGC
>probe:Drosophila_2:1640888_a_at:462:1; Interrogation_Position=2784; Antisense; AGGTGCCCGGCTGTTTCGAAAACTG
>probe:Drosophila_2:1640888_a_at:163:667; Interrogation_Position=2850; Antisense; TACTTTGTTGCTGTGTTGGTCCTTA

Paste this into a BLAST search page for me
GAGGGAGGCTAGATTGCCCACCACTATATCCACCATTACATTGCTCTGCTGAGTATGCAGGCCAAGCCGTCTATAATATGGCATGCCCTGTACTTCTGGTTGTCCCTGTACAGCTCCAGTATAAATGATGAGTCCAAGCGACCACTGGTATGGTAATCTTTCGATTGGTTCCCCGGGTTCCCCGGGAATATTGGTGCGATGACAATGTGGCTCTGACTGGCATGAAAATTCTTTCGGCTAACACGCGGCGGTTGTCATTTCGGTGGCCGGCACAAGTGACCTACGAACTCATTTTGCTGCAGGTGCCCGGCTGTTTCGAAAACTGTACTTTGTTGCTGTGTTGGTCCTTA

Full Affymetrix probeset data:

Annotations for 1640888_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720