FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640904_at:

>probe:Drosophila_2:1640904_at:231:23; Interrogation_Position=1022; Antisense; ATATCCTCAAGGATTTTCGCTTCCT
>probe:Drosophila_2:1640904_at:679:717; Interrogation_Position=1037; Antisense; TTCGCTTCCTCGACAGCAAGATTGA
>probe:Drosophila_2:1640904_at:723:345; Interrogation_Position=1161; Antisense; GCATATTCCTCGTTTTTACAAGCGT
>probe:Drosophila_2:1640904_at:596:355; Interrogation_Position=1201; Antisense; GCACTTGATATTCCTTGCTGTTCAC
>probe:Drosophila_2:1640904_at:569:655; Interrogation_Position=1256; Antisense; TAATGTTCCCTTATCGTTGAGTGCG
>probe:Drosophila_2:1640904_at:165:469; Interrogation_Position=1271; Antisense; GTTGAGTGCGAAATCCTCCAGCATA
>probe:Drosophila_2:1640904_at:581:389; Interrogation_Position=1311; Antisense; GAAATAACTTCTTCATCCGGACGAA
>probe:Drosophila_2:1640904_at:329:627; Interrogation_Position=1336; Antisense; TGCCGGTACGGTATGCAGCTGTATT
>probe:Drosophila_2:1640904_at:93:219; Interrogation_Position=1374; Antisense; AAGTCATCTCCGTGGACAGTACCTT
>probe:Drosophila_2:1640904_at:500:385; Interrogation_Position=1431; Antisense; GAAACGCAAGTATGTACCCACCAAA
>probe:Drosophila_2:1640904_at:678:389; Interrogation_Position=1475; Antisense; GAAAGCAATTGACCCACTCCGGAAT
>probe:Drosophila_2:1640904_at:154:365; Interrogation_Position=1523; Antisense; GAATAAACCGGACTTTTGCCATACT
>probe:Drosophila_2:1640904_at:3:621; Interrogation_Position=952; Antisense; TGCTACTCTGCTGTTTGGCAAACAT
>probe:Drosophila_2:1640904_at:155:359; Interrogation_Position=969; Antisense; GCAAACATCGCCCATTAAATTCATT

Paste this into a BLAST search page for me
ATATCCTCAAGGATTTTCGCTTCCTTTCGCTTCCTCGACAGCAAGATTGAGCATATTCCTCGTTTTTACAAGCGTGCACTTGATATTCCTTGCTGTTCACTAATGTTCCCTTATCGTTGAGTGCGGTTGAGTGCGAAATCCTCCAGCATAGAAATAACTTCTTCATCCGGACGAATGCCGGTACGGTATGCAGCTGTATTAAGTCATCTCCGTGGACAGTACCTTGAAACGCAAGTATGTACCCACCAAAGAAAGCAATTGACCCACTCCGGAATGAATAAACCGGACTTTTGCCATACTTGCTACTCTGCTGTTTGGCAAACATGCAAACATCGCCCATTAAATTCATT

Full Affymetrix probeset data:

Annotations for 1640904_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720