FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640932_s_at:

>probe:Drosophila_2:1640932_s_at:157:45; Interrogation_Position=2316; Antisense; ATCGCAATCCGCTGCCAGAGTATTT
>probe:Drosophila_2:1640932_s_at:306:443; Interrogation_Position=2372; Antisense; GATGATCCCTTGCAATTCCACTTCA
>probe:Drosophila_2:1640932_s_at:335:357; Interrogation_Position=2432; Antisense; GCACAGGTGTGGAAGCTCAGCTCAT
>probe:Drosophila_2:1640932_s_at:465:647; Interrogation_Position=2453; Antisense; TCATGCGACATGTGCGAGCTGGCCA
>probe:Drosophila_2:1640932_s_at:277:573; Interrogation_Position=2526; Antisense; GGCTGGGACCCATCTATTACGAGGA
>probe:Drosophila_2:1640932_s_at:230:483; Interrogation_Position=2553; Antisense; GTATCATGGGCAACGACATCACGCG
>probe:Drosophila_2:1640932_s_at:591:99; Interrogation_Position=2590; Antisense; AGAGATCCGTGTGGCCTATCGCTAT
>probe:Drosophila_2:1640932_s_at:90:683; Interrogation_Position=2606; Antisense; TATCGCTATGAGACACTGCTGGACG
>probe:Drosophila_2:1640932_s_at:228:137; Interrogation_Position=2628; Antisense; ACGAGCTGTCCAACATCTTCAAGGT
>probe:Drosophila_2:1640932_s_at:537:653; Interrogation_Position=2646; Antisense; TCAAGGTGAACCAGACGTGCTCCAT
>probe:Drosophila_2:1640932_s_at:211:509; Interrogation_Position=2662; Antisense; GTGCTCCATTGCAGACATGAACGCC
>probe:Drosophila_2:1640932_s_at:189:55; Interrogation_Position=2678; Antisense; ATGAACGCCACATAGTCTGGTCCAT
>probe:Drosophila_2:1640932_s_at:679:87; Interrogation_Position=2691; Antisense; AGTCTGGTCCATGCGGTACATCTGC
>probe:Drosophila_2:1640932_s_at:77:699; Interrogation_Position=2728; Antisense; TTGTGGCTTCCTATGCTAACTTAAT

Paste this into a BLAST search page for me
ATCGCAATCCGCTGCCAGAGTATTTGATGATCCCTTGCAATTCCACTTCAGCACAGGTGTGGAAGCTCAGCTCATTCATGCGACATGTGCGAGCTGGCCAGGCTGGGACCCATCTATTACGAGGAGTATCATGGGCAACGACATCACGCGAGAGATCCGTGTGGCCTATCGCTATTATCGCTATGAGACACTGCTGGACGACGAGCTGTCCAACATCTTCAAGGTTCAAGGTGAACCAGACGTGCTCCATGTGCTCCATTGCAGACATGAACGCCATGAACGCCACATAGTCTGGTCCATAGTCTGGTCCATGCGGTACATCTGCTTGTGGCTTCCTATGCTAACTTAAT

Full Affymetrix probeset data:

Annotations for 1640932_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720