FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640962_s_at:

>probe:Drosophila_2:1640962_s_at:604:357; Interrogation_Position=1298; Antisense; GCAAAATGCTTTTATCGGTGTGTAA
>probe:Drosophila_2:1640962_s_at:520:207; Interrogation_Position=1402; Antisense; AAGCAATTACTTATTCGTGGTCTAC
>probe:Drosophila_2:1640962_s_at:669:637; Interrogation_Position=1416; Antisense; TCGTGGTCTACTTTTTGATACTCCC
>probe:Drosophila_2:1640962_s_at:585:723; Interrogation_Position=1430; Antisense; TTGATACTCCCAAACTCGCTGTGTG
>probe:Drosophila_2:1640962_s_at:304:595; Interrogation_Position=1449; Antisense; TGTGTGCACCCGCAAGTAACTATAT
>probe:Drosophila_2:1640962_s_at:309:251; Interrogation_Position=1474; Antisense; CAACGTCTTAGTCAGACCTTTGCGT
>probe:Drosophila_2:1640962_s_at:314:103; Interrogation_Position=1487; Antisense; AGACCTTTGCGTACTTAACCGATCG
>probe:Drosophila_2:1640962_s_at:145:39; Interrogation_Position=1531; Antisense; ATCTCACCTGCAGTCGTTAGTCGAT
>probe:Drosophila_2:1640962_s_at:369:501; Interrogation_Position=1550; Antisense; GTCGATGCTAAGTTGGTTATGCTAA
>probe:Drosophila_2:1640962_s_at:579:677; Interrogation_Position=1567; Antisense; TATGCTAAGTCGTCACCAGAACCTG
>probe:Drosophila_2:1640962_s_at:247:381; Interrogation_Position=1585; Antisense; GAACCTGTTTCTATTTCTATTCGTA
>probe:Drosophila_2:1640962_s_at:582:115; Interrogation_Position=1664; Antisense; AGCATTATTTATGATACTCCCACAA
>probe:Drosophila_2:1640962_s_at:230:145; Interrogation_Position=1679; Antisense; ACTCCCACAATGATATTCCAACTAC
>probe:Drosophila_2:1640962_s_at:185:403; Interrogation_Position=1774; Antisense; GACTTTTGGTTCGATATTCCAGCGA

Paste this into a BLAST search page for me
GCAAAATGCTTTTATCGGTGTGTAAAAGCAATTACTTATTCGTGGTCTACTCGTGGTCTACTTTTTGATACTCCCTTGATACTCCCAAACTCGCTGTGTGTGTGTGCACCCGCAAGTAACTATATCAACGTCTTAGTCAGACCTTTGCGTAGACCTTTGCGTACTTAACCGATCGATCTCACCTGCAGTCGTTAGTCGATGTCGATGCTAAGTTGGTTATGCTAATATGCTAAGTCGTCACCAGAACCTGGAACCTGTTTCTATTTCTATTCGTAAGCATTATTTATGATACTCCCACAAACTCCCACAATGATATTCCAACTACGACTTTTGGTTCGATATTCCAGCGA

Full Affymetrix probeset data:

Annotations for 1640962_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720