FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1640984_s_at:

>probe:Drosophila_2:1640984_s_at:280:375; Interrogation_Position=1779; Antisense; GAAGAGGCCGGTGATCATCCATCGC
>probe:Drosophila_2:1640984_s_at:91:45; Interrogation_Position=1799; Antisense; ATCGCGCTATTCTTGGCTCAGTGGA
>probe:Drosophila_2:1640984_s_at:92:417; Interrogation_Position=1822; Antisense; GAGCGGATGATTGCCATTCTCACGG
>probe:Drosophila_2:1640984_s_at:80:713; Interrogation_Position=1838; Antisense; TTCTCACGGAGAACTTTGCTGGCAA
>probe:Drosophila_2:1640984_s_at:193:85; Interrogation_Position=1905; Antisense; AGTGGGTCCTGCCTATGATCAGTAC
>probe:Drosophila_2:1640984_s_at:391:35; Interrogation_Position=1922; Antisense; ATCAGTACGCCCAGTCAGTGCGGGA
>probe:Drosophila_2:1640984_s_at:424:447; Interrogation_Position=1987; Antisense; GATGCCGGCGACACGATGAACAAGA
>probe:Drosophila_2:1640984_s_at:154:29; Interrogation_Position=2014; Antisense; ATACGCAATGCTCAGTTGGCCCAGT
>probe:Drosophila_2:1640984_s_at:75:93; Interrogation_Position=2036; Antisense; AGTTCAACTTCATTCTGGTGGTGGG
>probe:Drosophila_2:1640984_s_at:662:75; Interrogation_Position=2066; Antisense; AGGAGCGCTCCTCGAATACCGTTAA
>probe:Drosophila_2:1640984_s_at:343:659; Interrogation_Position=2088; Antisense; TAACGTGCGCACTCGGGACAACAAG
>probe:Drosophila_2:1640984_s_at:240:159; Interrogation_Position=2105; Antisense; ACAACAAGGTGCACGGCGAGGTCTC
>probe:Drosophila_2:1640984_s_at:430:573; Interrogation_Position=2133; Antisense; GGCGGAACTCATCACAAAGCTGCAA
>probe:Drosophila_2:1640984_s_at:241:45; Interrogation_Position=2176; Antisense; ATCGCCAACGAGGACAGCTTCTAAG

Paste this into a BLAST search page for me
GAAGAGGCCGGTGATCATCCATCGCATCGCGCTATTCTTGGCTCAGTGGAGAGCGGATGATTGCCATTCTCACGGTTCTCACGGAGAACTTTGCTGGCAAAGTGGGTCCTGCCTATGATCAGTACATCAGTACGCCCAGTCAGTGCGGGAGATGCCGGCGACACGATGAACAAGAATACGCAATGCTCAGTTGGCCCAGTAGTTCAACTTCATTCTGGTGGTGGGAGGAGCGCTCCTCGAATACCGTTAATAACGTGCGCACTCGGGACAACAAGACAACAAGGTGCACGGCGAGGTCTCGGCGGAACTCATCACAAAGCTGCAAATCGCCAACGAGGACAGCTTCTAAG

Full Affymetrix probeset data:

Annotations for 1640984_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720