FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641004_a_at:

>probe:Drosophila_2:1641004_a_at:88:343; Interrogation_Position=2186; Antisense; GCTTCCAGACTTACTGCCATTTTAA
>probe:Drosophila_2:1641004_a_at:564:709; Interrogation_Position=2207; Antisense; TTAAATCACCTATTACCACGCTGGA
>probe:Drosophila_2:1641004_a_at:656:381; Interrogation_Position=2233; Antisense; GAACTGGACATGGTTAACGCTAACT
>probe:Drosophila_2:1641004_a_at:7:201; Interrogation_Position=2248; Antisense; AACGCTAACTTTACACTCGACATTG
>probe:Drosophila_2:1641004_a_at:160:275; Interrogation_Position=2268; Antisense; CATTGTGGCCCTAATTGTGATCTTC
>probe:Drosophila_2:1641004_a_at:150:281; Interrogation_Position=2278; Antisense; CTAATTGTGATCTTCGTGGTGCTGC
>probe:Drosophila_2:1641004_a_at:355:569; Interrogation_Position=2310; Antisense; GGCATACCTGTTCTTGCGCTGGAAG
>probe:Drosophila_2:1641004_a_at:96:333; Interrogation_Position=2327; Antisense; GCTGGAAGCTGAAGACTGTGCGATA
>probe:Drosophila_2:1641004_a_at:315:27; Interrogation_Position=2389; Antisense; ATAGCTTTCTATTTTTTAGTCGCGA
>probe:Drosophila_2:1641004_a_at:202:87; Interrogation_Position=2406; Antisense; AGTCGCGAAATTCTTCTTTTAAGTG
>probe:Drosophila_2:1641004_a_at:390:547; Interrogation_Position=2443; Antisense; GGAGGTTTCTTATCTTAAATCAGCT
>probe:Drosophila_2:1641004_a_at:290:165; Interrogation_Position=2459; Antisense; AAATCAGCTTGATTCCAGCCGCATA
>probe:Drosophila_2:1641004_a_at:630:7; Interrogation_Position=2470; Antisense; ATTCCAGCCGCATATGTAGTAAAAC
>probe:Drosophila_2:1641004_a_at:464:203; Interrogation_Position=2502; Antisense; AACCACTGTTGGAGCACATCATTGA

Paste this into a BLAST search page for me
GCTTCCAGACTTACTGCCATTTTAATTAAATCACCTATTACCACGCTGGAGAACTGGACATGGTTAACGCTAACTAACGCTAACTTTACACTCGACATTGCATTGTGGCCCTAATTGTGATCTTCCTAATTGTGATCTTCGTGGTGCTGCGGCATACCTGTTCTTGCGCTGGAAGGCTGGAAGCTGAAGACTGTGCGATAATAGCTTTCTATTTTTTAGTCGCGAAGTCGCGAAATTCTTCTTTTAAGTGGGAGGTTTCTTATCTTAAATCAGCTAAATCAGCTTGATTCCAGCCGCATAATTCCAGCCGCATATGTAGTAAAACAACCACTGTTGGAGCACATCATTGA

Full Affymetrix probeset data:

Annotations for 1641004_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720