FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641021_a_at:

>probe:Drosophila_2:1641021_a_at:148:95; Interrogation_Position=6024; Antisense; AGTTGCCTTCTAACAAGTTGCCTTA
>probe:Drosophila_2:1641021_a_at:469:469; Interrogation_Position=6040; Antisense; GTTGCCTTAGAACACACACAAATGT
>probe:Drosophila_2:1641021_a_at:168:599; Interrogation_Position=6062; Antisense; TGTAAAGCCCAATAACTCCAAAAAG
>probe:Drosophila_2:1641021_a_at:23:701; Interrogation_Position=6121; Antisense; TTTATAAGCAAACTCATTCGGTATG
>probe:Drosophila_2:1641021_a_at:631:429; Interrogation_Position=6145; Antisense; GAGTTTAGTTTTTATGGGTGCGATC
>probe:Drosophila_2:1641021_a_at:183:533; Interrogation_Position=6161; Antisense; GGTGCGATCATTGGCAATCCGTCGT
>probe:Drosophila_2:1641021_a_at:394:233; Interrogation_Position=6176; Antisense; AATCCGTCGTAGTTTAAGATCACTG
>probe:Drosophila_2:1641021_a_at:501:33; Interrogation_Position=6206; Antisense; ATCAATGACCATAGAATCTGCCCAA
>probe:Drosophila_2:1641021_a_at:587:37; Interrogation_Position=6221; Antisense; ATCTGCCCAATCTACACTTACAATG
>probe:Drosophila_2:1641021_a_at:480:665; Interrogation_Position=6239; Antisense; TACAATGGACGCAACAACCGATGGG
>probe:Drosophila_2:1641021_a_at:466:187; Interrogation_Position=6308; Antisense; AACTCGATTTTTGCAGTTCGGCCAA
>probe:Drosophila_2:1641021_a_at:212:471; Interrogation_Position=6323; Antisense; GTTCGGCCAAAGCATAGTTATGTTA
>probe:Drosophila_2:1641021_a_at:434:1; Interrogation_Position=6421; Antisense; AACAAGTTGCTAGCGGTTAAGTCAC
>probe:Drosophila_2:1641021_a_at:382:541; Interrogation_Position=6435; Antisense; GGTTAAGTCACCAAAGTCTGTACAT

Paste this into a BLAST search page for me
AGTTGCCTTCTAACAAGTTGCCTTAGTTGCCTTAGAACACACACAAATGTTGTAAAGCCCAATAACTCCAAAAAGTTTATAAGCAAACTCATTCGGTATGGAGTTTAGTTTTTATGGGTGCGATCGGTGCGATCATTGGCAATCCGTCGTAATCCGTCGTAGTTTAAGATCACTGATCAATGACCATAGAATCTGCCCAAATCTGCCCAATCTACACTTACAATGTACAATGGACGCAACAACCGATGGGAACTCGATTTTTGCAGTTCGGCCAAGTTCGGCCAAAGCATAGTTATGTTAAACAAGTTGCTAGCGGTTAAGTCACGGTTAAGTCACCAAAGTCTGTACAT

Full Affymetrix probeset data:

Annotations for 1641021_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720