FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641031_s_at:

>probe:Drosophila_2:1641031_s_at:535:173; Interrogation_Position=1292; Antisense; AAACCAGCCGGAGTACATCATCAGT
>probe:Drosophila_2:1641031_s_at:372:485; Interrogation_Position=1315; Antisense; GTAGTCCAATTGTTAATCCCATGAG
>probe:Drosophila_2:1641031_s_at:598:329; Interrogation_Position=1349; Antisense; GCGTGGATCACAGCACTTGGACGAT
>probe:Drosophila_2:1641031_s_at:717:137; Interrogation_Position=1369; Antisense; ACGATCATCCGTCGAAACGCCGAGT
>probe:Drosophila_2:1641031_s_at:484:175; Interrogation_Position=1383; Antisense; AAACGCCGAGTCGACGACAGTCTGT
>probe:Drosophila_2:1641031_s_at:72:401; Interrogation_Position=1398; Antisense; GACAGTCTGTCGATATCCGGATACT
>probe:Drosophila_2:1641031_s_at:98:545; Interrogation_Position=1416; Antisense; GGATACTATCCAACACAACCTCTAG
>probe:Drosophila_2:1641031_s_at:556:459; Interrogation_Position=1474; Antisense; GATTTGGCGAGTTCATGTGCCACTC
>probe:Drosophila_2:1641031_s_at:355:313; Interrogation_Position=1524; Antisense; GCCTTGCGCTTGGTGCAGAAGTTCA
>probe:Drosophila_2:1641031_s_at:263:217; Interrogation_Position=1542; Antisense; AAGTTCACCCGCGAATTGGTCCAGT
>probe:Drosophila_2:1641031_s_at:296:631; Interrogation_Position=1619; Antisense; TCCGGTAGATCAGAGCAGCGAGTCG
>probe:Drosophila_2:1641031_s_at:24:83; Interrogation_Position=1690; Antisense; AGGGATATTGGCACGCGTGTCTACA
>probe:Drosophila_2:1641031_s_at:261:329; Interrogation_Position=1704; Antisense; GCGTGTCTACATCTATGCGTATAGC
>probe:Drosophila_2:1641031_s_at:182:701; Interrogation_Position=1785; Antisense; TTTTAAGTCTTCTAGCCTCGCAGTA

Paste this into a BLAST search page for me
AAACCAGCCGGAGTACATCATCAGTGTAGTCCAATTGTTAATCCCATGAGGCGTGGATCACAGCACTTGGACGATACGATCATCCGTCGAAACGCCGAGTAAACGCCGAGTCGACGACAGTCTGTGACAGTCTGTCGATATCCGGATACTGGATACTATCCAACACAACCTCTAGGATTTGGCGAGTTCATGTGCCACTCGCCTTGCGCTTGGTGCAGAAGTTCAAAGTTCACCCGCGAATTGGTCCAGTTCCGGTAGATCAGAGCAGCGAGTCGAGGGATATTGGCACGCGTGTCTACAGCGTGTCTACATCTATGCGTATAGCTTTTAAGTCTTCTAGCCTCGCAGTA

Full Affymetrix probeset data:

Annotations for 1641031_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720