FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641035_a_at:

>probe:Drosophila_2:1641035_a_at:371:595; Interrogation_Position=1022; Antisense; TGGGCCGAGATTTGCCAGCGCAATG
>probe:Drosophila_2:1641035_a_at:323:297; Interrogation_Position=1062; Antisense; CGCTGACACCGTACCTAGATGAGGA
>probe:Drosophila_2:1641035_a_at:323:113; Interrogation_Position=1101; Antisense; AGCACCTCTACTTGGATAACACGAA
>probe:Drosophila_2:1641035_a_at:141:213; Interrogation_Position=1131; Antisense; AAGACTTTGGCTACGTGCTGCAGCA
>probe:Drosophila_2:1641035_a_at:504:171; Interrogation_Position=1160; Antisense; AAAGTCACTCGCGAGCTGCTCATGG
>probe:Drosophila_2:1641035_a_at:76:207; Interrogation_Position=1205; Antisense; AAGCAGCAATTGTTTCCGAAATCGT
>probe:Drosophila_2:1641035_a_at:337:467; Interrogation_Position=1228; Antisense; GTTGGTTCTTTGATTCACTACTTCT
>probe:Drosophila_2:1641035_a_at:716:467; Interrogation_Position=1271; Antisense; GTTGACATGCACTCGGACCCGGAGA
>probe:Drosophila_2:1641035_a_at:720:411; Interrogation_Position=1286; Antisense; GACCCGGAGACATTTATTCCCTGTA
>probe:Drosophila_2:1641035_a_at:182:11; Interrogation_Position=1301; Antisense; ATTCCCTGTAGCTTGTAATCCACTA
>probe:Drosophila_2:1641035_a_at:130:687; Interrogation_Position=1361; Antisense; TATACGGACACGGATACTCTCACAT
>probe:Drosophila_2:1641035_a_at:435:605; Interrogation_Position=1459; Antisense; TGATACATTCCAGTCGATCCAGCGA
>probe:Drosophila_2:1641035_a_at:19:329; Interrogation_Position=1497; Antisense; GCGTACGAGTATTCCATTGTGATTA
>probe:Drosophila_2:1641035_a_at:516:459; Interrogation_Position=1517; Antisense; GATTAGCTAAGTGACCAACCGCAAT

Paste this into a BLAST search page for me
TGGGCCGAGATTTGCCAGCGCAATGCGCTGACACCGTACCTAGATGAGGAAGCACCTCTACTTGGATAACACGAAAAGACTTTGGCTACGTGCTGCAGCAAAAGTCACTCGCGAGCTGCTCATGGAAGCAGCAATTGTTTCCGAAATCGTGTTGGTTCTTTGATTCACTACTTCTGTTGACATGCACTCGGACCCGGAGAGACCCGGAGACATTTATTCCCTGTAATTCCCTGTAGCTTGTAATCCACTATATACGGACACGGATACTCTCACATTGATACATTCCAGTCGATCCAGCGAGCGTACGAGTATTCCATTGTGATTAGATTAGCTAAGTGACCAACCGCAAT

Full Affymetrix probeset data:

Annotations for 1641035_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720