FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641068_a_at:

>probe:Drosophila_2:1641068_a_at:270:345; Interrogation_Position=1566; Antisense; GCATCAGGAAGCTGGTGTACCCAAA
>probe:Drosophila_2:1641068_a_at:587:81; Interrogation_Position=1601; Antisense; AGGGCGGACGACACCTGGCAGTTAA
>probe:Drosophila_2:1641068_a_at:699:489; Interrogation_Position=1642; Antisense; GTACAAACAGGCCATCCAGATCGAA
>probe:Drosophila_2:1641068_a_at:26:225; Interrogation_Position=1674; Antisense; AAGGAGCGGATCAACCCTGTGACTT
>probe:Drosophila_2:1641068_a_at:329:311; Interrogation_Position=1703; Antisense; GCCAACTTTCCGCAGAGCTATAATC
>probe:Drosophila_2:1641068_a_at:158:617; Interrogation_Position=1733; Antisense; TGCAAGCAGCACTACACACAGCAGA
>probe:Drosophila_2:1641068_a_at:253:411; Interrogation_Position=1756; Antisense; GACCCTGGCCAGCATCAAAAGTGAT
>probe:Drosophila_2:1641068_a_at:428:535; Interrogation_Position=1795; Antisense; GGTGCAGAATTCCTTCAAGATCCCT
>probe:Drosophila_2:1641068_a_at:84:631; Interrogation_Position=1820; Antisense; TCCTGCTGCAAGTGCGCGTTGAAGA
>probe:Drosophila_2:1641068_a_at:213:65; Interrogation_Position=1862; Antisense; ATGGGATTCTCCAGTCGATGGCTGC
>probe:Drosophila_2:1641068_a_at:165:725; Interrogation_Position=1899; Antisense; TTGAGCAAGAAGTTTCACCCACCAC
>probe:Drosophila_2:1641068_a_at:406:621; Interrogation_Position=1972; Antisense; TGCTGAATCCACACATAGACCAATG
>probe:Drosophila_2:1641068_a_at:122:481; Interrogation_Position=2025; Antisense; GTCATTTTAACCATATTCGTGTCAT
>probe:Drosophila_2:1641068_a_at:223:721; Interrogation_Position=2060; Antisense; TTGACTTCCACGTCTAATGCCTAAG

Paste this into a BLAST search page for me
GCATCAGGAAGCTGGTGTACCCAAAAGGGCGGACGACACCTGGCAGTTAAGTACAAACAGGCCATCCAGATCGAAAAGGAGCGGATCAACCCTGTGACTTGCCAACTTTCCGCAGAGCTATAATCTGCAAGCAGCACTACACACAGCAGAGACCCTGGCCAGCATCAAAAGTGATGGTGCAGAATTCCTTCAAGATCCCTTCCTGCTGCAAGTGCGCGTTGAAGAATGGGATTCTCCAGTCGATGGCTGCTTGAGCAAGAAGTTTCACCCACCACTGCTGAATCCACACATAGACCAATGGTCATTTTAACCATATTCGTGTCATTTGACTTCCACGTCTAATGCCTAAG

Full Affymetrix probeset data:

Annotations for 1641068_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720