FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641078_s_at:

>probe:Drosophila_2:1641078_s_at:479:441; Interrogation_Position=2108; Antisense; GATGGACCATTGAACACTGAGGAGA
>probe:Drosophila_2:1641078_s_at:96:527; Interrogation_Position=2158; Antisense; GGGACCAAAGCAACTGAGAGATACT
>probe:Drosophila_2:1641078_s_at:550:425; Interrogation_Position=2173; Antisense; GAGAGATACTGACTAACGCCGACTG
>probe:Drosophila_2:1641078_s_at:406:199; Interrogation_Position=2187; Antisense; AACGCCGACTGAACGGAACTCGAAT
>probe:Drosophila_2:1641078_s_at:391:357; Interrogation_Position=2354; Antisense; GCAAATCAAACGCAAACGAGTCATT
>probe:Drosophila_2:1641078_s_at:644:285; Interrogation_Position=2400; Antisense; CTGTGTGTTGTGTACTTTGTGTGTA
>probe:Drosophila_2:1641078_s_at:171:673; Interrogation_Position=2453; Antisense; TAGAGTCGAACCATCCTATGTAAAT
>probe:Drosophila_2:1641078_s_at:398:459; Interrogation_Position=2478; Antisense; GATATAGTCGCCATGTGATCGTGTA
>probe:Drosophila_2:1641078_s_at:625:381; Interrogation_Position=2523; Antisense; GAACGATTGCATTCCATGGCCAGGG
>probe:Drosophila_2:1641078_s_at:459:9; Interrogation_Position=2533; Antisense; ATTCCATGGCCAGGGATTCAACAAG
>probe:Drosophila_2:1641078_s_at:154:643; Interrogation_Position=2562; Antisense; TCTCCTGCGTGAGAGCATCCAGCAA
>probe:Drosophila_2:1641078_s_at:516:425; Interrogation_Position=2572; Antisense; GAGAGCATCCAGCAATAACCAACTA
>probe:Drosophila_2:1641078_s_at:473:203; Interrogation_Position=2639; Antisense; AACCATTTTGCCATTTGTTTTCATG
>probe:Drosophila_2:1641078_s_at:63:711; Interrogation_Position=2677; Antisense; TTCCGACTGGAGGATGTACATCTTC

Paste this into a BLAST search page for me
GATGGACCATTGAACACTGAGGAGAGGGACCAAAGCAACTGAGAGATACTGAGAGATACTGACTAACGCCGACTGAACGCCGACTGAACGGAACTCGAATGCAAATCAAACGCAAACGAGTCATTCTGTGTGTTGTGTACTTTGTGTGTATAGAGTCGAACCATCCTATGTAAATGATATAGTCGCCATGTGATCGTGTAGAACGATTGCATTCCATGGCCAGGGATTCCATGGCCAGGGATTCAACAAGTCTCCTGCGTGAGAGCATCCAGCAAGAGAGCATCCAGCAATAACCAACTAAACCATTTTGCCATTTGTTTTCATGTTCCGACTGGAGGATGTACATCTTC

Full Affymetrix probeset data:

Annotations for 1641078_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720