FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641089_s_at:

>probe:Drosophila_2:1641089_s_at:43:71; Interrogation_Position=6505; Antisense; AGGCTATCCGCCAGAATCAAATGAA
>probe:Drosophila_2:1641089_s_at:490:245; Interrogation_Position=6572; Antisense; AATTCGCGATAATTTTTCACCTGGA
>probe:Drosophila_2:1641089_s_at:394:705; Interrogation_Position=6587; Antisense; TTCACCTGGAAAGAAGACTACCTGT
>probe:Drosophila_2:1641089_s_at:71:17; Interrogation_Position=6663; Antisense; ATTTACTTGGCCGATCCCACAAACG
>probe:Drosophila_2:1641089_s_at:254:45; Interrogation_Position=6676; Antisense; ATCCCACAAACGGTCATCGCATATA
>probe:Drosophila_2:1641089_s_at:1:23; Interrogation_Position=6728; Antisense; ATATTTATCATTTCCCCGAGCGCAG
>probe:Drosophila_2:1641089_s_at:556:303; Interrogation_Position=6743; Antisense; CCGAGCGCAGCTAATGACTATGGTT
>probe:Drosophila_2:1641089_s_at:343:29; Interrogation_Position=6840; Antisense; ATAAACCTTGATCTAGTATTGCTGG
>probe:Drosophila_2:1641089_s_at:627:481; Interrogation_Position=6855; Antisense; GTATTGCTGGTTTTACTGTAACTTA
>probe:Drosophila_2:1641089_s_at:123:493; Interrogation_Position=6892; Antisense; GTAAGACTCATTGTGAAGCCATCAG
>probe:Drosophila_2:1641089_s_at:678:439; Interrogation_Position=6916; Antisense; GATGGACTTGGCCTAATCATAGCAA
>probe:Drosophila_2:1641089_s_at:568:357; Interrogation_Position=6937; Antisense; GCAACTAGTAGTCTGTAAGGGCATC
>probe:Drosophila_2:1641089_s_at:229:493; Interrogation_Position=6951; Antisense; GTAAGGGCATCTCAATTTCATTTTA
>probe:Drosophila_2:1641089_s_at:531:297; Interrogation_Position=6986; Antisense; CGCTGTAAATCGCATTCTCATCTTT

Paste this into a BLAST search page for me
AGGCTATCCGCCAGAATCAAATGAAAATTCGCGATAATTTTTCACCTGGATTCACCTGGAAAGAAGACTACCTGTATTTACTTGGCCGATCCCACAAACGATCCCACAAACGGTCATCGCATATAATATTTATCATTTCCCCGAGCGCAGCCGAGCGCAGCTAATGACTATGGTTATAAACCTTGATCTAGTATTGCTGGGTATTGCTGGTTTTACTGTAACTTAGTAAGACTCATTGTGAAGCCATCAGGATGGACTTGGCCTAATCATAGCAAGCAACTAGTAGTCTGTAAGGGCATCGTAAGGGCATCTCAATTTCATTTTACGCTGTAAATCGCATTCTCATCTTT

Full Affymetrix probeset data:

Annotations for 1641089_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720