FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641143_s_at:

>probe:Drosophila_2:1641143_s_at:718:707; Interrogation_Position=1310; Antisense; TTACAACTACTTTGCGCCCTGGTTT
>probe:Drosophila_2:1641143_s_at:319:41; Interrogation_Position=1342; Antisense; ATCTGGGCCAGATTCGATCGGCTAG
>probe:Drosophila_2:1641143_s_at:247:41; Interrogation_Position=1358; Antisense; ATCGGCTAGTGCCAATGCTACAGTG
>probe:Drosophila_2:1641143_s_at:594:483; Interrogation_Position=1430; Antisense; GTATGTGACCCTGCTGAAACTGCAC
>probe:Drosophila_2:1641143_s_at:254:655; Interrogation_Position=1457; Antisense; TAATAGTACTCTACTGCGATCCCTG
>probe:Drosophila_2:1641143_s_at:311:447; Interrogation_Position=1500; Antisense; GATGCCATACTGCAGTTGGACCTCA
>probe:Drosophila_2:1641143_s_at:74:101; Interrogation_Position=1564; Antisense; AGAGCTGGTACCACGAGGTTCTCGA
>probe:Drosophila_2:1641143_s_at:361:593; Interrogation_Position=1605; Antisense; TGGGAGCTTAACATGCCGCAGAGTC
>probe:Drosophila_2:1641143_s_at:235:633; Interrogation_Position=1631; Antisense; TCCCACCCGATAGCTGCATTTTAAA
>probe:Drosophila_2:1641143_s_at:74:687; Interrogation_Position=1662; Antisense; TATACTGTGCGATATGTGGCAGCCA
>probe:Drosophila_2:1641143_s_at:37:475; Interrogation_Position=1718; Antisense; GTTAGGAACCTCTAGTGCGTAGTTA
>probe:Drosophila_2:1641143_s_at:95:329; Interrogation_Position=1734; Antisense; GCGTAGTTAATGTTCTGCCTGTGAT
>probe:Drosophila_2:1641143_s_at:614:89; Interrogation_Position=1785; Antisense; AGTACACATCCGACTTGCATTTCAG
>probe:Drosophila_2:1641143_s_at:358:277; Interrogation_Position=1810; Antisense; CTAACTAGACCGTAAGATCGCCTTA

Paste this into a BLAST search page for me
TTACAACTACTTTGCGCCCTGGTTTATCTGGGCCAGATTCGATCGGCTAGATCGGCTAGTGCCAATGCTACAGTGGTATGTGACCCTGCTGAAACTGCACTAATAGTACTCTACTGCGATCCCTGGATGCCATACTGCAGTTGGACCTCAAGAGCTGGTACCACGAGGTTCTCGATGGGAGCTTAACATGCCGCAGAGTCTCCCACCCGATAGCTGCATTTTAAATATACTGTGCGATATGTGGCAGCCAGTTAGGAACCTCTAGTGCGTAGTTAGCGTAGTTAATGTTCTGCCTGTGATAGTACACATCCGACTTGCATTTCAGCTAACTAGACCGTAAGATCGCCTTA

Full Affymetrix probeset data:

Annotations for 1641143_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720