FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641148_a_at:

>probe:Drosophila_2:1641148_a_at:424:197; Interrogation_Position=2403; Antisense; AACGTGGGCGACACATCTACCTTGG
>probe:Drosophila_2:1641148_a_at:199:641; Interrogation_Position=2418; Antisense; TCTACCTTGGCCGATGAGCAAATTG
>probe:Drosophila_2:1641148_a_at:627:3; Interrogation_Position=2439; Antisense; ATTGTGGAGCAACTGTTCGCCAACC
>probe:Drosophila_2:1641148_a_at:232:19; Interrogation_Position=2573; Antisense; ATTTCCACCACTTACGTATCGCGAT
>probe:Drosophila_2:1641148_a_at:380:285; Interrogation_Position=2606; Antisense; CTGTAAATCTCCCTCTACTTATATG
>probe:Drosophila_2:1641148_a_at:202:601; Interrogation_Position=2641; Antisense; TGCTTAATGTTTGTTCCGTTCCGGG
>probe:Drosophila_2:1641148_a_at:34:671; Interrogation_Position=2667; Antisense; TACGGCGTGGTTAGCACCTTTCAAA
>probe:Drosophila_2:1641148_a_at:161:281; Interrogation_Position=2702; Antisense; CTCGTAAGCCTAAGCGTGTGCGTAA
>probe:Drosophila_2:1641148_a_at:649:439; Interrogation_Position=2738; Antisense; GATGGTTTCCGATCCCAGTTATATA
>probe:Drosophila_2:1641148_a_at:414:461; Interrogation_Position=2773; Antisense; GATTTTGTGTACTTGCCTGTTCATC
>probe:Drosophila_2:1641148_a_at:412:647; Interrogation_Position=2793; Antisense; TCATCGTAGTTGACATGCTCACCAC
>probe:Drosophila_2:1641148_a_at:2:267; Interrogation_Position=2830; Antisense; CAGTTCTTTTGTTTCTTCGTTGTAG
>probe:Drosophila_2:1641148_a_at:173:709; Interrogation_Position=2862; Antisense; TTAAGTTCTCGCTAATTCGTTGTGA
>probe:Drosophila_2:1641148_a_at:669:29; Interrogation_Position=2951; Antisense; ATACACGATTCCAATTGTCGCCACA

Paste this into a BLAST search page for me
AACGTGGGCGACACATCTACCTTGGTCTACCTTGGCCGATGAGCAAATTGATTGTGGAGCAACTGTTCGCCAACCATTTCCACCACTTACGTATCGCGATCTGTAAATCTCCCTCTACTTATATGTGCTTAATGTTTGTTCCGTTCCGGGTACGGCGTGGTTAGCACCTTTCAAACTCGTAAGCCTAAGCGTGTGCGTAAGATGGTTTCCGATCCCAGTTATATAGATTTTGTGTACTTGCCTGTTCATCTCATCGTAGTTGACATGCTCACCACCAGTTCTTTTGTTTCTTCGTTGTAGTTAAGTTCTCGCTAATTCGTTGTGAATACACGATTCCAATTGTCGCCACA

Full Affymetrix probeset data:

Annotations for 1641148_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720