FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641164_s_at:

>probe:Drosophila_2:1641164_s_at:487:413; Interrogation_Position=1379; Antisense; GACCTAGTGCAGAGCATTGGCGTTT
>probe:Drosophila_2:1641164_s_at:608:579; Interrogation_Position=1407; Antisense; TGGCCGCCGTCCTAATTAAAGTTTG
>probe:Drosophila_2:1641164_s_at:550:217; Interrogation_Position=1425; Antisense; AAGTTTGTCCAGGTGCCAAGTATGC
>probe:Drosophila_2:1641164_s_at:323:217; Interrogation_Position=1442; Antisense; AAGTATGCTGATCCCCTGTGTACTC
>probe:Drosophila_2:1641164_s_at:548:285; Interrogation_Position=1457; Antisense; CTGTGTACTCTCATATTCTCAATTA
>probe:Drosophila_2:1641164_s_at:330:655; Interrogation_Position=1488; Antisense; TAATGACTACCTTGCGTCTGTTTCG
>probe:Drosophila_2:1641164_s_at:375:479; Interrogation_Position=1507; Antisense; GTTTCGGGAGTCTTTGGGCATCATC
>probe:Drosophila_2:1641164_s_at:479:655; Interrogation_Position=1555; Antisense; TAATATGCGCACTCTGCACTTGGAG
>probe:Drosophila_2:1641164_s_at:626:515; Interrogation_Position=1596; Antisense; GTGTCAGATCTTTGCACCACCTAAA
>probe:Drosophila_2:1641164_s_at:297:177; Interrogation_Position=1618; Antisense; AAACGTGTGGCAACAGACCTCTCAG
>probe:Drosophila_2:1641164_s_at:310:607; Interrogation_Position=1653; Antisense; TGATGGTGCATCTCGTTACAGACTC
>probe:Drosophila_2:1641164_s_at:355:249; Interrogation_Position=1690; Antisense; CAATGAGGTACTGCAGGCTGCCACG
>probe:Drosophila_2:1641164_s_at:450:541; Interrogation_Position=1846; Antisense; GGATTGCATCTAGCCGTGTTATTTA
>probe:Drosophila_2:1641164_s_at:355:663; Interrogation_Position=1918; Antisense; TAAACATCCAGTGACATTACCCCAA

Paste this into a BLAST search page for me
GACCTAGTGCAGAGCATTGGCGTTTTGGCCGCCGTCCTAATTAAAGTTTGAAGTTTGTCCAGGTGCCAAGTATGCAAGTATGCTGATCCCCTGTGTACTCCTGTGTACTCTCATATTCTCAATTATAATGACTACCTTGCGTCTGTTTCGGTTTCGGGAGTCTTTGGGCATCATCTAATATGCGCACTCTGCACTTGGAGGTGTCAGATCTTTGCACCACCTAAAAAACGTGTGGCAACAGACCTCTCAGTGATGGTGCATCTCGTTACAGACTCCAATGAGGTACTGCAGGCTGCCACGGGATTGCATCTAGCCGTGTTATTTATAAACATCCAGTGACATTACCCCAA

Full Affymetrix probeset data:

Annotations for 1641164_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720