FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641172_at:

>probe:Drosophila_2:1641172_at:681:57; Interrogation_Position=13; Antisense; ATGTTGGCTTTGCTGTTTTTCACTC
>probe:Drosophila_2:1641172_at:230:363; Interrogation_Position=139; Antisense; GCAATCAGTCGGCTTAGGAACTCAA
>probe:Drosophila_2:1641172_at:688:73; Interrogation_Position=154; Antisense; AGGAACTCAATCTCTGTGCAATACA
>probe:Drosophila_2:1641172_at:695:577; Interrogation_Position=241; Antisense; TGGCGGCCTTTTCTCTATAATTTCA
>probe:Drosophila_2:1641172_at:117:19; Interrogation_Position=260; Antisense; ATTTCACCGCAAATCTGTGCGACTT
>probe:Drosophila_2:1641172_at:530:595; Interrogation_Position=275; Antisense; TGTGCGACTTTCTTGCTCGTAACAA
>probe:Drosophila_2:1641172_at:561:589; Interrogation_Position=318; Antisense; TGGATATGCCTACCTAAGGCCATAT
>probe:Drosophila_2:1641172_at:378:709; Interrogation_Position=344; Antisense; TTGTCAAGAACTACTCGTGTCCCTT
>probe:Drosophila_2:1641172_at:602:275; Interrogation_Position=37; Antisense; CTTTTGGTATTGACCTCTACGGAGG
>probe:Drosophila_2:1641172_at:264:239; Interrogation_Position=418; Antisense; AATCTACGCAATCGATTTCCGATCG
>probe:Drosophila_2:1641172_at:665:533; Interrogation_Position=448; Antisense; GGTGAATACGCTCTGCAATTGACAT
>probe:Drosophila_2:1641172_at:596:227; Interrogation_Position=505; Antisense; AATGGATCCATCGAGTACAACAATT
>probe:Drosophila_2:1641172_at:345:93; Interrogation_Position=71; Antisense; AGTTCAAGAGTCTTCACTGTGCCGC
>probe:Drosophila_2:1641172_at:43:143; Interrogation_Position=86; Antisense; ACTGTGCCGCTTTTGACCAAGATTT

Paste this into a BLAST search page for me
ATGTTGGCTTTGCTGTTTTTCACTCGCAATCAGTCGGCTTAGGAACTCAAAGGAACTCAATCTCTGTGCAATACATGGCGGCCTTTTCTCTATAATTTCAATTTCACCGCAAATCTGTGCGACTTTGTGCGACTTTCTTGCTCGTAACAATGGATATGCCTACCTAAGGCCATATTTGTCAAGAACTACTCGTGTCCCTTCTTTTGGTATTGACCTCTACGGAGGAATCTACGCAATCGATTTCCGATCGGGTGAATACGCTCTGCAATTGACATAATGGATCCATCGAGTACAACAATTAGTTCAAGAGTCTTCACTGTGCCGCACTGTGCCGCTTTTGACCAAGATTT

Full Affymetrix probeset data:

Annotations for 1641172_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720