FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1641183_a_at:

>probe:Drosophila_2:1641183_a_at:168:713; Interrogation_Position=1663; Antisense; TTCTAGTTGCGTTCTTTTAGTTTGT
>probe:Drosophila_2:1641183_a_at:67:601; Interrogation_Position=1701; Antisense; TCTTGTTTAGTATGTCGTCCCCTGA
>probe:Drosophila_2:1641183_a_at:517:633; Interrogation_Position=1718; Antisense; TCCCCTGATGATGGCGCTTTAATTT
>probe:Drosophila_2:1641183_a_at:462:297; Interrogation_Position=1759; Antisense; CGAAGCGACGCTGCCTGAGGATTCA
>probe:Drosophila_2:1641183_a_at:223:299; Interrogation_Position=1790; Antisense; CGCTCTCTCGATTTCTAGTACAATT
>probe:Drosophila_2:1641183_a_at:351:363; Interrogation_Position=1818; Antisense; GAATATCTGCACATGCGCCTTAATG
>probe:Drosophila_2:1641183_a_at:691:347; Interrogation_Position=1988; Antisense; GCATGTTATCCAAACTGTTGCCGAA
>probe:Drosophila_2:1641183_a_at:326:387; Interrogation_Position=2015; Antisense; GAAAAGCCTTGTACGACTTGTATGT
>probe:Drosophila_2:1641183_a_at:61:253; Interrogation_Position=2052; Antisense; CAACGGAAGTAGGATGCCTGGATCA
>probe:Drosophila_2:1641183_a_at:187:317; Interrogation_Position=2067; Antisense; GCCTGGATCAGGAAGTAGCTGCTTT
>probe:Drosophila_2:1641183_a_at:297:487; Interrogation_Position=2081; Antisense; GTAGCTGCTTTTATCAAATGTAATC
>probe:Drosophila_2:1641183_a_at:701:493; Interrogation_Position=2100; Antisense; GTAATCTCTGATACTTTGTCCTAAT
>probe:Drosophila_2:1641183_a_at:356:507; Interrogation_Position=2144; Antisense; GTGCGAGTTCAAGTTTTATGTTTCC
>probe:Drosophila_2:1641183_a_at:220:681; Interrogation_Position=2160; Antisense; TATGTTTCCTTGTTTAATCTTAGAC

Paste this into a BLAST search page for me
TTCTAGTTGCGTTCTTTTAGTTTGTTCTTGTTTAGTATGTCGTCCCCTGATCCCCTGATGATGGCGCTTTAATTTCGAAGCGACGCTGCCTGAGGATTCACGCTCTCTCGATTTCTAGTACAATTGAATATCTGCACATGCGCCTTAATGGCATGTTATCCAAACTGTTGCCGAAGAAAAGCCTTGTACGACTTGTATGTCAACGGAAGTAGGATGCCTGGATCAGCCTGGATCAGGAAGTAGCTGCTTTGTAGCTGCTTTTATCAAATGTAATCGTAATCTCTGATACTTTGTCCTAATGTGCGAGTTCAAGTTTTATGTTTCCTATGTTTCCTTGTTTAATCTTAGAC

Full Affymetrix probeset data:

Annotations for 1641183_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720